Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0057 ATGATGGGGAGAACATATTCATCAGAGAGTGATGAAGGCAATAATGGTTTGAAGAAGGGGCCATGGACAACAGAAGAGGATAGAAAACTGATAGATTACATTGAGAAACATGGACATGGAAGCTGGAGGGCACTTCCAAAGCTTGCAGGATTGAACAGGTGTGGAAAAAGTTGCAGGCTGAGGTGGACTAACTATCTCAGGCCGGACATCAAAAGAGGAAACTTCTCTGACCAAGAACAGCAAGTCATCATCAATTTGCATGCAGTACTTGGGAACAAGTGGTCCACCATAGCAGGTCATCTGCCAGGAAGAACTGACAATGAAATAAAAAACTTTTGGAATACTCATTTGAAGAAGAAGCTCATGCAAATGGGGTTAGACCCAGTGACTCACCGTCCTAGATCTCATCACCTTAATCTTCTCTCCTATCTGCAACAATTATTATCTTCTCTCGCAGCAAATAATAATCATAATAATCATTGGGACATCCTTAATACCATTCAAACTTTGTCTCCTTCACAATTAGCCAAACTCCATTTGCTTTACAATATGCTTCAAGCCCTCACAGCTACTACTACTACTGCTGTTGCTGCTGCTGCTACTATGAGTCTAACTCCATGCAATCTGGAGCCACTTGTCAATCCTATGATGATGACAGATCATCTTCTCTTACAAGAACAACATCAAACCCACGTTGGTACTTTTCCTTCTCTTTCCAACTTGCCAAACGTGGTTGAAGGTCTTCATCATCAGCATCAGCAGCAGCATCTACCACAAGCGATTGTGAGTGATGATGAGCTTCTTAAGATAATGCCATATTGTTTTGGTGCTCCAGCAGCAGCTTCCTCTTCGAGCTCTCTTCCTAATCTGGTTTCGCCCACACCTGATTGCTCTCCATCTGTTAACAAAATGAAAAACCTAAATGATGGCACTGATATTATTAATCGTCCTTCTTCCACTTCAACAACCTTTGATTCATTAGGAGATTTTATGGGTGAGCATGCAAGTGAAGCTTACTGGAAACATCTCTTAGACCAAGAATCTAACCAGCCATGGTCGTAA 1062 0.419 MMGRTYSSESDEGNNGLKKGPWTTEEDRKLIDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGNFSDQEQQVIINLHAVLGNKWSTIAGHLPGRTDNEIKNFWNTHLKKKLMQMGLDPVTHRPRSHHLNLLSYLQQLLSSLAANNNHNNHWDILNTIQTLSPSQLAKLHLLYNMLQALTATTTTAVAAAATMSLTPCNLEPLVNPMMMTDHLLLQEQHQTHVGTFPSLSNLPNVVEGLHHQHQQQHLPQAIVSDDELLKIMPYCFGAPAAASSSSSLPNLVSPTPDCSPSVNKMKNLNDGTDIINRPSSTSTTFDSLGDFMGEHASEAYWKHLLDQESNQPWS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0057 353 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Prci7g0057 353 MobiDBLite consensus disorder prediction 1 22 - -
Prci7g0057 353 FunFam MYB-related transcription factor 18 71 - -
Prci7g0057 353 FunFam Transcription factor MYB39 74 135 - -
Prci7g0057 353 Gene3D - 74 121 - -
Prci7g0057 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Prci7g0057 353 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 205 - -
Prci7g0057 353 SUPERFAMILY Homeodomain-like 16 113 IPR009057 -
Prci7g0057 353 SMART sant 71 119 IPR001005 -
Prci7g0057 353 SMART sant 18 68 IPR001005 -
Prci7g0057 353 CDD SANT 74 117 IPR001005 -
Prci7g0057 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Prci7g0057 353 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Prci7g0057 353 Pfam Myb-like DNA-binding domain 72 117 IPR001005 -
Prci7g0057 353 Gene3D - 16 72 - -
Prci7g0057 353 CDD SANT 21 66 IPR001005 -
Prci7g0057 353 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0057 Prci-Chr7 6106738 6109965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0057 2 345 MYB Transcription Factor Family AT5G16770 43.909 1.40e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci7g0057 Myb_DNA-binding 1.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0057 K09422 - gmx:547488 317.005