Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0040 ATGGCTTTTCTCCTTAACCCCCACAAGCTGTTGCTAATCTTCTTCTACTTTCTTTCTTGTTCCTTTCTCGCCATTAATTCACTTTCAAGTACGGTTTCCATTTCTGAAACTTCCAACCACACAGTGATCTGTGCGTTGCAGAATACGGACAAGCTTCAAGGACAAATAGCATTCCTCAACTGTACCAGCTTTCCCACTGGCATTCATATTCAAGTGAACCCCAACATTTCCTTCTCTGAGATTGCAGGAGGAAATGGGTTTCTCTGTTCATTGAGGCCACCAATGCGTTCTCTTTCTGCCTCTTCTTCTGTCATGTTTTGTTGGAGATTCTCTTACAATGATACAAATGTTGTTCCCAAGCGCGTATACCGTGGGCCTGTGATTCAAGATCTGGAAGCAGGAAACTCCCAAATTTGTGGCCTATCAAGCTCCAACAATGGCCTTAACTGCTGGCGATGGCCTCGGTTCAACACGAGTATTGTGAAAAGCTTCTCGAGCATATCTGTGGGAGAGAATTTCGTTTGTGGGTTATTGGAAACATCTGGGAATATTAATTGCGTAGGAAATAATAATAATGGCATAGTTGGGCATGAACCCGAAGGAAATTTTTCTGTGATTGCTGCAGGGTCGAGACATGCTTGTGCTATCTCCTCCATTAATGGAAGCTTGGATTGTTGGGGTGACGTACCAGCAGGCACAATGACGACGCCTCAAGGGAGATTCATCTCGCTGGCCTTGGGAGATAATAGAACTTGTGCTTTGAGGGCTGTGAACCGAACAATTGTTTGCTGGGGTGCAGATAGTTTCAGAATTCCGGAGAGCTTGAGAAACGAATCTTTTCAAGCAATTACAGCTAAAGAAAGTGTTTTCTGTGGTGTCGTATCTGGTGATTATTCTTTATATTGTTGGGGAAACGATAATTTGGGGATGAACGGGACAGCTTATAAGGTGTATGATAAGGTCCTACCTGGTCCTTGTAGGACTGAATGTCCTTGTGGACCATTGCCAGGTTCTACCCAATTCTGTGTTCGGGGTCAAGAATCTATTTGCAGTTCTTGTGAGAGCCAACAACCTGAATCCCCACAGTCGCCCTCGCCACCGCCGGCGCTTGGGCCAGTAAGTGTTGCTTCACAATCAGGGCAAAGTGATTGGAGCAGCAAAATGGTGGCATTTCTAGTGGTTGGCTGTATTGGTTCACTTTCTTTGATACTAGTCATGGCATTCCTTGTCTACAAGTATTGCAAAGGCCGAGGATGCCGGCGTGTCCACGACTCCGGCCGGTTGGATGATCCAGAAGATCAACCGGCAAGCCAACAACCAACTTTAGAGAAGAAACTAAGCCATATGATTAGCCTCGGAAATGGAGGCCATTTGGAGGAATTTTCTCTGCAAATACTATTGGAAGCAACCAACAATTTCTCAGAAAATCAAAAAATAGGATCAGGCAGTTTTGGATCAGTGTACCATACAACACTCGAAGATGGAAGAGAAGTCGCCATTAAAAGAGCTGAGATCTCACCCACCTCCCCATCTTACAAAATCCCAGGAGGCACTAAGCGTCAAGAAGACAAAGACAATGCGTTTGTGAATGAACTCGAATCATTATCCAGACTCAACCATAAGAACCTGGTGAGATTACTAGGTTTCTTTGAGGACAAGAATGAGAGAATTCTAGTCTACGAGTTCATGAACAATGGCAGCCTAACTGATCACCTTCACAAGTTCCACACTTCAACCTCAAATTCTCCTCTCATGTCATGGTCAGGACGCATTCAAGTAGCTCTAGATGCAGCCAGAGGCATAGAGTACCTGCACGTGTATACGATCCCGCCAATCATTCATCGCGATATTAAATCGGCCAACATACTATTAGACGCCAAATGGACAGCCAAAGTATCAGATTTCGGACTCTCCTTAATGGGTCCTGAAGATGAAGAGTCGCATCTTTCTCTTCTAGCTGCAGGAACCGTGGGGTACATGGATCCAGAGTATTACAGGCTGCAACACCTCACTACAAAGAGCGACGTGTACAGTTTTGGTGTTGTTTTGCTTGAACTACTTTGTGGATATAAATCTATACATAGGAACGAGAATGGGACGCCAAGGAATGTGGTGGATTTTGTGCTGCCATACATTTTGCAGGATGAGATTCATAGGGTTTTGGATCAGAGATTGCCACCACCAACACCGTATGAGATAGAGGCAGTGGCATTTGTGGGATATTTGGCTGCAGATTGTGTGAGTTTAGAAGGACGTGATAGGCCAACGATGACAAATGTTGTAAATAGGTTGGAAACAGCTTTGGATGCTTGTTTAGCCCAACCAAAATCAACACTCTCTCGTTTTAACTCTTCTAATTCAGATTAG 2367 0.4453 MAFLLNPHKLLLIFFYFLSCSFLAINSLSSTVSISETSNHTVICALQNTDKLQGQIAFLNCTSFPTGIHIQVNPNISFSEIAGGNGFLCSLRPPMRSLSASSSVMFCWRFSYNDTNVVPKRVYRGPVIQDLEAGNSQICGLSSSNNGLNCWRWPRFNTSIVKSFSSISVGENFVCGLLETSGNINCVGNNNNGIVGHEPEGNFSVIAAGSRHACAISSINGSLDCWGDVPAGTMTTPQGRFISLALGDNRTCALRAVNRTIVCWGADSFRIPESLRNESFQAITAKESVFCGVVSGDYSLYCWGNDNLGMNGTAYKVYDKVLPGPCRTECPCGPLPGSTQFCVRGQESICSSCESQQPESPQSPSPPPALGPVSVASQSGQSDWSSKMVAFLVVGCIGSLSLILVMAFLVYKYCKGRGCRRVHDSGRLDDPEDQPASQQPTLEKKLSHMISLGNGGHLEEFSLQILLEATNNFSENQKIGSGSFGSVYHTTLEDGREVAIKRAEISPTSPSYKIPGGTKRQEDKDNAFVNELESLSRLNHKNLVRLLGFFEDKNERILVYEFMNNGSLTDHLHKFHTSTSNSPLMSWSGRIQVALDAARGIEYLHVYTIPPIIHRDIKSANILLDAKWTAKVSDFGLSLMGPEDEESHLSLLAAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLELLCGYKSIHRNENGTPRNVVDFVLPYILQDEIHRVLDQRLPPPTPYEIEAVAFVGYLAADCVSLEGRDRPTMTNVVNRLETALDACLAQPKSTLSRFNSSNSD 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0040 788 CDD STKc_IRAK 479 765 - -
Prci7g0040 788 SUPERFAMILY RCC1/BLIP-II 105 318 IPR009091 -
Prci7g0040 788 SUPERFAMILY Protein kinase-like (PK-like) 456 765 IPR011009 -
Prci7g0040 788 Gene3D Transferase(Phosphotransferase) domain 1 563 781 - -
Prci7g0040 788 ProSitePatterns Protein kinases ATP-binding region signature. 479 501 IPR017441 GO:0005524
Prci7g0040 788 ProSiteProfiles Protein kinase domain profile. 473 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0040 788 Pfam Protein kinase domain 474 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0040 788 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 563 776 - -
Prci7g0040 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Prci7g0040 788 MobiDBLite consensus disorder prediction 354 378 - -
Prci7g0040 788 Gene3D - 155 338 IPR009091 -
Prci7g0040 788 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 201 777 IPR044815 GO:0004674
Prci7g0040 788 Gene3D Phosphorylase Kinase; domain 1 445 562 - -
Prci7g0040 788 SMART serkin_6 473 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0040 Prci-Chr7 4962440 4965086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0040 30 784 Receptor kinase-like Gene Family AT5G47850 50.843 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Prci7g0040 Pkinase 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0040 - - qsa:O6P43_029962 979.163