Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0009 ATGGTCATGGACAAGCTTGGACCTAACTTGAAGGATTTTTTGAATTCCTCAACTCATGGGATATCTGCGGAAATGATTGCAAGTATAGGTGTTCAGTCATTATCAACCTTGGAGGAAATTCACTCTAGAGGTTATTTACATGGAGATATAAAACCAGAGAACCTTTTGCTTGGGAAGCCAAATTCTCCAGATGAGAAGAAATTATTTATTGTTGACTTTGGATTAGCAATCAAGTGGAGAGACTCCAACGGGAAGCATGTTGAATATGAGCAATTCCCTAATATGTTTAGAGGGACTATGGGATATGCTAGTGTTCACGCACACCTGGGAAGAACTCCTAGCAGAAGGGATGATCTTGAATCTCTTGCATATACACTCATATTTCTTTATCAAGGTCAATTACCATGGCAAGAATTTCAAGATATTGATATTGACAAATCCTTCATTGTTTGTCAAGAAAAGCTGAAAACACCTCCCCTTCTAGCATCCTCTCTCGCTCCTGTCTATAAATTTCTTTGGAGTGTTGTGAACTTGAAATTTGATGAAGAACCTAATTATTCCAAGCTAAGGTCGTTGTTTGATGAGATAATGGGACCTATTCCTGCATTAGGACCAATTAACACTGAAGGTGCACGAAAGGTTGGACAAAAACAAAGTAGATTGAATTTTGGGGGACATGATACGCGACCAGTGAAGATAAAGACAACTCGGTCAGGTCTTCCTGCTACACAATGGATTTCAATTTTTAATGCAGGAAAACCAACGAAACAGAGGTTTCATTATCCCGTGTCTAATGAGATGTTAGCACAACATGTGGAGAAAGCGATTATAGATGGCTTCCATATCAGCTGTGTAGCCTCCCATTCTAATCTTTGGGCACTTATTATGGATACTAGAATTGGTTTTACGAGTCAAGTTTACAAACTTTCACCTTTCTTCTTACCCGAGCAATGGAGCAGGGAGCAATGGGAAAAGGGTTTTTGCATTACCTCTATTGCTGGAGCTGAGGATGGGAGCTCTATTGTAGTCATGTCAAAAGGTGCAGGGTATGGTCCACAGTTATACAAAGTTTCTAAACATTTTCCCTTCGAGTTGATAGAGACTATGTCAGCTCAACATTCTGGATTTTATGATCAGGTGATTGAATATGATTTCCACTATCCAAGTGACGGCTTCCATATTCAGTGGGACAAAGGTTATTTGATAACGTCAGTAGCAGCAACAAAAGATGAAATTGCTTTGGTATTTAGCATGCCCAAGGAGACTCGTTATGGGGAGGTTACTTCACAGGAATCTTTGCAAACGTCTGAGTTTCCCCGCAAACATATCAAGGAAAATTTGGAAAGAAATATGTACATTGCATGTTTGAGTTATGGTCGCACAGTTCGCTAG 1392 0.3973 MVMDKLGPNLKDFLNSSTHGISAEMIASIGVQSLSTLEEIHSRGYLHGDIKPENLLLGKPNSPDEKKLFIVDFGLAIKWRDSNGKHVEYEQFPNMFRGTMGYASVHAHLGRTPSRRDDLESLAYTLIFLYQGQLPWQEFQDIDIDKSFIVCQEKLKTPPLLASSLAPVYKFLWSVVNLKFDEEPNYSKLRSLFDEIMGPIPALGPINTEGARKVGQKQSRLNFGGHDTRPVKIKTTRSGLPATQWISIFNAGKPTKQRFHYPVSNEMLAQHVEKAIIDGFHISCVASHSNLWALIMDTRIGFTSQVYKLSPFFLPEQWSREQWEKGFCITSIAGAEDGSSIVVMSKGAGYGPQLYKVSKHFPFELIETMSAQHSGFYDQVIEYDFHYPSDGFHIQWDKGYLITSVAATKDEIALVFSMPKETRYGEVTSQESLQTSEFPRKHIKENLERNMYIACLSYGRTVR 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0009 463 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0009 463 Gene3D Transferase(Phosphotransferase) domain 1 1 221 - -
Prci7g0009 463 SMART serkin_6 1 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0009 463 PANTHER CASEIN KINASE-RELATED 1 212 - -
Prci7g0009 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Prci7g0009 463 Pfam Protein kinase domain 9 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0009 463 SUPERFAMILY Protein kinase-like (PK-like) 1 200 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0009 Prci-Chr7 355328 371839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0009 37 173 MAP Kinase Kinase Kinase AT4G14780 27.737 8.46e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Prci7g0009 Pkinase 4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0009 - - gmx:100819969 555.829