Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0008 ATGGTCATGGACAAGCTTGGACCTAACTTGAAGGATTTTTTGAATTCCTCAACTCATGGTTATTTACATGGAGATATAAAACCAGAGAACCTTTTGCTTGGGAAGCCAAATTCTCCAGATGAGAAGAAATTATTTATTGTTGACTTTGGATTAGCAATCAAGTGGAGAGACTCCAACGGGAAGCATGTTGAATATGAGCAATTCCCTAATATGTTTAGAGGGACTATGGGATATGCTAGTGTTCACGCACACCTGGGAAGAACTCCTAGCAGAAGGGATGATCTTGAATCTCTTGCATATACACTCATATTTCTTTATCAAGGTCAATTACCATGGCAAGAATTTCAAGATATTGATATTGACAAATCCTTCATTGTTTGTCAAGAAAAGCTGAAAACACCTCCCCTTCTAGCATCCTCTCTCGCTCCTGTCTATAAATTTCTTTGGAGTGTTGTGAACTTGAAATTTGATGAAGAACCTAATTATTCCAAGCTAAGGTCGTTGTTTGATGAGATAATGGGACCTATTCCTGCATTAGGACCAATTAACACTGAAGGTGCACGAAAGGTTGGACAAAAACAAAGTAGATTGAATTTTGGGGGACATGATACGCGACCAGTGAAGATAAAGACAACTCGGTCAGGTCTTCCTGCTACACAATGGATTTCAATTTTTAATGCAGGAAAACCAACGAAACAGAGGTTTCATTATCCCGTGTCTAATGAGATGTTAGCACAACATGTGGAGAAAGCGATTATAGATGGCTTCCATATCAGCTGTGTAGCCTCCCATTCTAATCTTTGGGCACTTATTATGGATACTAGAATTGGTTTTACGAGTCAAGTTTACAAACTTTCACCTTTCTTCTTACCCGAGCAATGGAGCAGGGAGCAATGGGAAAAGGGTTTTTGCATTACCTCTATTGCTGGAGCTGAGGATGGGAGCTCTATTGTAGTCATGTCAAAAGGTGCAGGGTATGGTCCACAGTTATACAAAGTTTCTAAACATTTTCCCTTCGAGTTGATAGAGACTATGTCAGCTCAACATTCTGGATTTTATGATCAGGTGATTGAATATGATTTCCACTATCCAAGTGACGGCTTCCATATTCAGTGGGACAAAGGTTATTTGATAACGTCAGTAGCAGCAACAAAAGATGAAATTGCTTTGGTATTTAGCATGCCCAAGGAGACTCGTTATGGGGAGGTTACTTCACAGGAATCTTTGCAAACGTCTGAGTTTCCCCGCAAACATATCAAGGAAAATTTGGAAAGAAATATGTACATTGCATGTTTGAGTTATGGTCGCACAGTTCGCTAG 1320 0.397 MVMDKLGPNLKDFLNSSTHGYLHGDIKPENLLLGKPNSPDEKKLFIVDFGLAIKWRDSNGKHVEYEQFPNMFRGTMGYASVHAHLGRTPSRRDDLESLAYTLIFLYQGQLPWQEFQDIDIDKSFIVCQEKLKTPPLLASSLAPVYKFLWSVVNLKFDEEPNYSKLRSLFDEIMGPIPALGPINTEGARKVGQKQSRLNFGGHDTRPVKIKTTRSGLPATQWISIFNAGKPTKQRFHYPVSNEMLAQHVEKAIIDGFHISCVASHSNLWALIMDTRIGFTSQVYKLSPFFLPEQWSREQWEKGFCITSIAGAEDGSSIVVMSKGAGYGPQLYKVSKHFPFELIETMSAQHSGFYDQVIEYDFHYPSDGFHIQWDKGYLITSVAATKDEIALVFSMPKETRYGEVTSQESLQTSEFPRKHIKENLERNMYIACLSYGRTVR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0008 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
Prci7g0008 439 ProSiteProfiles Protein kinase domain profile. 1 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0008 439 Pfam Fungal protein kinase 19 104 IPR040976 -
Prci7g0008 439 SUPERFAMILY Protein kinase-like (PK-like) 1 176 IPR011009 -
Prci7g0008 439 Gene3D Transferase(Phosphotransferase) domain 1 1 197 - -
Prci7g0008 439 PANTHER CASEIN KINASE-RELATED 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0008 Prci-Chr7 355328 371839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0008 22 149 MAP Kinase Kinase Kinase AT4G14780 27.344 2.49e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Prci7g0008 Pkinase_fungal 7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0008 - - gmx:100819969 516.153