Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0007 ATGGACAAGCTTGGACCTAACTTGAAGGATTTTTTGAATTCCTCAACTCATGGGATATCTGCGGAAATGATTGCAAGTATAGGTGTTCAGTCATTATCAACCTTGGAGGAAATTCACTCTAGAGGTTATTTACATGGAGATATAAAACCAGAGAACCTTTTGCTTGGGAAGCCAAATTCTCCAGATGAGAAGAAATTATTTATTGTTGACTTTGGATTAGCAATCAAGTGGAGAGACTCCAACGGGAAGCATGTTGAATATGAGCAATTCCCTAATATGTTTAGAGGGACTATGGGATATGCTAGTGTTCACGCACACCTGGGAAGAACTCCTAGCAGAAGGGATGATCTTGAATCTCTTGCATATACACTCATATTTCTTTATCAAGGTCAATTACCATGGCAAGAATTTCAAGATATTGATATTGACAAATCCTTCATTGTTTGTCAAGAAAAGCTGAAAACACCTCCCCTTCTAGCATCCTCTCTCGCTCCTGTCTATAAATTTCTTTGGAGTGTTGTGAACTTGAAATTTGATGAAGAACCTAATTATTCCAAGCTAAGGTCGTTGTTTGATGAGATAATGGGACCTATTCCTGCATTAGGACCAATTAACACTGAAGGTGCACGAAAGGTTGGACAAAAACAAAGTAGATTGAATTTTGGGGGACATGATACGCGACCAGTGAAGATAAAGACAACTCGGTCAGGTCTTCCTGCTACACAATGGATTTCAATTTTTAATGCAGGAAAACCAACGAAACAGAGGTTTCATTATCCCGTGTCTAATGAGATGTTAGCACAACATGTGGAGAAAGCGATTATAGATGGCTTCCATATCAGCTGTGTAGCCTCCCATTCTAATCTTTGGGCACTTATTATGGATACTAGAATTGGTTTTACGAGTCAAGTTTACAAACTTTCACCTTTCTTCTTACCCGAGCAATGGAGCAGGGAGCAATGGGAAAAGGGTTTTTGCATTACCTCTATTGCTGGAGCTGAGGATGGGAGCTCTATTGTAGTCATGTCAAAAGGTGCAGGGTATGGTCCACAGTTATACAAAGTTTCTAAACATTTTCCCTTCGAGTTGATAGAGACTATGTCAGCTCAACATTCTGGATTTTATGATCAGGTGATTGAATATGATTTCCACTATCCAAGTGACGGCTTCCATATTCAGTGGGACAAAGGTTATTTGATAACGTCAGTAGCAGCAACAAAAGATGAAATTGCTTTGGTATTTAGCATGCCCAAGGAGACTCGTTATGGGGAGGTTACTTCACAGGAATCTTTGCAAACGTCTGAGTTTCCCCGCAAACATATCAAGGAAAATTTGGAAAGAAATATGTACATTGCATGTTTGAGTTATGGTCGCACAGTTCGCTAG 1386 0.3968 MDKLGPNLKDFLNSSTHGISAEMIASIGVQSLSTLEEIHSRGYLHGDIKPENLLLGKPNSPDEKKLFIVDFGLAIKWRDSNGKHVEYEQFPNMFRGTMGYASVHAHLGRTPSRRDDLESLAYTLIFLYQGQLPWQEFQDIDIDKSFIVCQEKLKTPPLLASSLAPVYKFLWSVVNLKFDEEPNYSKLRSLFDEIMGPIPALGPINTEGARKVGQKQSRLNFGGHDTRPVKIKTTRSGLPATQWISIFNAGKPTKQRFHYPVSNEMLAQHVEKAIIDGFHISCVASHSNLWALIMDTRIGFTSQVYKLSPFFLPEQWSREQWEKGFCITSIAGAEDGSSIVVMSKGAGYGPQLYKVSKHFPFELIETMSAQHSGFYDQVIEYDFHYPSDGFHIQWDKGYLITSVAATKDEIALVFSMPKETRYGEVTSQESLQTSEFPRKHIKENLERNMYIACLSYGRTVR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0007 461 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0007 461 Pfam Protein kinase domain 7 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0007 461 SUPERFAMILY Protein kinase-like (PK-like) 1 198 IPR011009 -
Prci7g0007 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Prci7g0007 461 PANTHER CASEIN KINASE-RELATED 1 210 - -
Prci7g0007 461 Gene3D Transferase(Phosphotransferase) domain 1 1 219 - -
Prci7g0007 461 SMART serkin_6 1 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0007 Prci-Chr7 355328 371839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0007 35 171 MAP Kinase Kinase Kinase AT4G14780 27.737 8.25e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Prci7g0007 Pkinase 7.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0007 - - gmx:100819969 552.362