Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0006 ATGGACAAGCTTGGACCTAACTTGAAGGATTTTTTGAATTCCTCAACTCATGGTTATTTACATGGAGATATAAAACCAGAGAACCTTTTGCTTGGGAAGCCAAATTCTCCAGATGAGAAGAAATTATTTATTGTTGACTTTGGATTAGCAATCAAGTGGAGAGACTCCAACGGGAAGCATGTTGAATATGAGCAATTCCCTAATATGTTTAGAGGGACTATGGGATATGCTAGTGTTCACGCACACCTGGGAAGAACTCCTAGCAGAAGGGATGATCTTGAATCTCTTGCATATACACTCATATTTCTTTATCAAGGTCAATTACCATGGCAAGAATTTCAAGATATTGATATTGACAAATCCTTCATTGTTTGTCAAGAAAAGCTGAAAACACCTCCCCTTCTAGCATCCTCTCTCGCTCCTGTCTATAAATTTCTTTGGAGTGTTGTGAACTTGAAATTTGATGAAGAACCTAATTATTCCAAGCTAAGGTCGTTGTTTGATGAGATAATGGGACCTATTCCTGCATTAGGACCAATTAACACTGAAGGTGCACGAAAGGTTGGACAAAAACAAAGTAGATTGAATTTTGGGGGACATGATACGCGACCAGTGAAGATAAAGACAACTCGGTCAGGTCTTCCTGCTACACAATGGATTTCAATTTTTAATGCAGGAAAACCAACGAAACAGAGGTTTCATTATCCCGTGTCTAATGAGATGTTAGCACAACATGTGGAGAAAGCGATTATAGATGGCTTCCATATCAGCTGTGTAGCCTCCCATTCTAATCTTTGGGCACTTATTATGGATACTAGAATTGGTTTTACGAGTCAAGTTTACAAACTTTCACCTTTCTTCTTACCCGAGCAATGGAGCAGGGAGCAATGGGAAAAGGGTTTTTGCATTACCTCTATTGCTGGAGCTGAGGATGGGAGCTCTATTGTAGTCATGTCAAAAGGTGCAGGGTATGGTCCACAGTTATACAAAGTTTCTAAACATTTTCCCTTCGAGTTGATAGAGACTATGTCAGCTCAACATTCTGGATTTTATGATCAGGTGATTGAATATGATTTCCACTATCCAAGTGACGGCTTCCATATTCAGTGGGACAAAGGTTATTTGATAACGTCAGTAGCAGCAACAAAAGATGAAATTGCTTTGGTATTTAGCATGCCCAAGGAGACTCGTTATGGGGAGGTTACTTCACAGGAATCTTTGCAAACGTCTGAGTTTCCCCGCAAACATATCAAGGAAAATTTGGAAAGAAATATGTACATTGCATGTTTGAGTTATGGTCGCACAGTTCGCTAG 1314 0.3965 MDKLGPNLKDFLNSSTHGYLHGDIKPENLLLGKPNSPDEKKLFIVDFGLAIKWRDSNGKHVEYEQFPNMFRGTMGYASVHAHLGRTPSRRDDLESLAYTLIFLYQGQLPWQEFQDIDIDKSFIVCQEKLKTPPLLASSLAPVYKFLWSVVNLKFDEEPNYSKLRSLFDEIMGPIPALGPINTEGARKVGQKQSRLNFGGHDTRPVKIKTTRSGLPATQWISIFNAGKPTKQRFHYPVSNEMLAQHVEKAIIDGFHISCVASHSNLWALIMDTRIGFTSQVYKLSPFFLPEQWSREQWEKGFCITSIAGAEDGSSIVVMSKGAGYGPQLYKVSKHFPFELIETMSAQHSGFYDQVIEYDFHYPSDGFHIQWDKGYLITSVAATKDEIALVFSMPKETRYGEVTSQESLQTSEFPRKHIKENLERNMYIACLSYGRTVR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0006 437 SUPERFAMILY Protein kinase-like (PK-like) 1 174 IPR011009 -
Prci7g0006 437 PANTHER CASEIN KINASE-RELATED 16 186 - -
Prci7g0006 437 Gene3D Transferase(Phosphotransferase) domain 1 10 195 - -
Prci7g0006 437 Pfam Fungal protein kinase 17 102 IPR040976 -
Prci7g0006 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Prci7g0006 437 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0006 Prci-Chr7 355328 371839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0006 20 147 MAP Kinase Kinase Kinase AT4G14780 27.344 2.14e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Prci7g0006 Pkinase_fungal 7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0006 - - gmx:100819969 512.686