Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci799g0001 ATGCCTACCATTTCTCCGCTACTTCTTCTTTCATTCCTTACTTATCTTCCCATTCTCACTGCCCAGCCTGACCTGAGATATGCCTCTTGTTTCAACGATAGAGGTAACTATACAAATACGAGCACGTACCAAAGCAGCTTCAATATCCTTGTTTCAGAGCTCACTTCCAACACACAAATTGACTATGGCTTCTACAATTTCTCCCACGGTCAAAGTCCAGACAGAGTTAGCTTAATTGGGTTGTGTAGAGGAGATGTTAAACCAAACGAATGTCGTAGTTGCCTCAACAATGCCTCAATTCTCGTCCCAAAGTCGTGTCCGAATCGGAAGGAGGCCATGGGAGGCTATGACGAATGCTTTCTGCGATACTCAAACCGTTCAATATTTGGGGTCATGGAAACAGACGTTTCAATCTACTTGTGGAATCCGAATAACGCAACAGACGTGGAAAATTACAACAAAGTGGTCAGCGACTTGTTGGGTCGACTGAGAATAAAAGCTGCGGCTGGAGATTCACTTGGCAAGTATGCAGCAGCAAATGAATCGGCGGGCAATTTTCAAACCGCATTTGGGGCAGTTCAGTGCACTCTTGACTTGTCTGAGCAAGAATGCTCCGACTGCTTGACGGCGGCGATCTCAGAAATTCCAAAATGTTGTTCCACAAAGACAGGTGGCAGGGTCATCAAACCCAGCTGCAATATTAGGTATGAGAACTACAGATTCTTCGAACCTGTGGCCGAGGATTCACCACCACCATCGTCTCCTTTACTTCCTCCAACAGGGGATGACAAAGCATCAAGAACCATCATTGCTGTTGTTGTGCCGATTGCTGCAATAATCATACTGATCATCTCTATCTTCATTTATTTTAGAATGAGGAAACCCAGAGAGACCATTCATACTGATGATGAAGCTGAACTTGAGGATGAAATTAAACCAACAGACTCATTGCAACTAGACTTCGAAACCATCAGAAATGCAACAGATAATTTTTCTGAAGGAAATAAACTTGGACAAGGTGGATTTGGACCAGTCTACAAGGGCAAGCTCTACAATGGAGAAGAAATTGCTGTCAAAAGGTTATCCAAGAATTCTGGACAAGGAGATATAGAATTTAAGAATGAAGTAATGTTGGTGGCCAAGCTTCAGCATCGCAATTTAGTGAGACTCCTTGGCTTCTGCTTGGAAAGAAGAGAAAGGCTACTCGTTTATGAGTTTCTTCCCAATAAAAGCCTTGACTATTTATTATTTGATCCAAGTCAACGTGCTAAACTAGATTGGGAGTTACGCTACAAGATTATAGTGGGCATTGCTCGTGGTCTTCTTTATCTTCATGAGGATTCTCGACTACGAATTATTCATCGTGATCTCAAAGCAAGTAATATTCTTTTAGATGAAGAGTTGAATCCCAAAATATCAGATTTTGGTATGGCAATATTGTTTGTTATAGATCAAACGCAAAGCAATACTAGTAGAATAGTTGGAACCTATGGATATATGGCTCCAGAGTATTTAATGCGTGGACAATTCTCCATAAAATCGATGTCTTTAGTTTCGGTGTCCTACTCTTAG 1572 0.4173 MPTISPLLLLSFLTYLPILTAQPDLRYASCFNDRGNYTNTSTYQSSFNILVSELTSNTQIDYGFYNFSHGQSPDRVSLIGLCRGDVKPNECRSCLNNASILVPKSCPNRKEAMGGYDECFLRYSNRSIFGVMETDVSIYLWNPNNATDVENYNKVVSDLLGRLRIKAAAGDSLGKYAAANESAGNFQTAFGAVQCTLDLSEQECSDCLTAAISEIPKCCSTKTGGRVIKPSCNIRYENYRFFEPVAEDSPPPSSPLLPPTGDDKASRTIIAVVVPIAAIIILIISIFIYFRMRKPRETIHTDDEAELEDEIKPTDSLQLDFETIRNATDNFSEGNKLGQGGFGPVYKGKLYNGEEIAVKRLSKNSGQGDIEFKNEVMLVAKLQHRNLVRLLGFCLERRERLLVYEFLPNKSLDYLLFDPSQRAKLDWELRYKIIVGIARGLLYLHEDSRLRIIHRDLKASNILLDEELNPKISDFGMAILFVIDQTQSNTSRIVGTYGYMAPEYLMRGQFSIKSMSLVSVSYS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci799g0001 523 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 17 514 - -
Prci799g0001 523 SUPERFAMILY Protein kinase-like (PK-like) 320 514 IPR011009 -
Prci799g0001 523 Gene3D - 24 127 IPR038408 -
Prci799g0001 523 Gene3D - 133 241 IPR038408 -
Prci799g0001 523 ProSiteProfiles Protein kinase domain profile. 331 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci799g0001 523 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 23 128 - -
Prci799g0001 523 Gene3D Phosphorylase Kinase; domain 1 294 406 - -
Prci799g0001 523 Pfam Salt stress response/antifungal 30 125 IPR002902 -
Prci799g0001 523 Pfam Salt stress response/antifungal 145 239 IPR002902 -
Prci799g0001 523 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 407 498 - -
Prci799g0001 523 FunFam Cysteine-rich receptor-like protein kinase 10 136 241 - -
Prci799g0001 523 Pfam Protein kinase domain 332 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci799g0001 523 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Prci799g0001 523 ProSiteProfiles Gnk2-homologous domain profile. 134 241 IPR002902 -
Prci799g0001 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Prci799g0001 523 Gene3D Transferase(Phosphotransferase) domain 1 407 514 - -
Prci799g0001 523 SMART serkin_6 331 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci799g0001 523 FunFam Cysteine-rich receptor-like protein kinase 17 300 406 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci799g0001 7 514 Receptor kinase-like Gene Family AT4G21410 49.720 7.83e-162 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci799g0001 Pkinase 4.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci799g0001 - - qsa:O6P43_031179 637.491