Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci792g0001 ATGGAGAGAGATTTCATGGGTTTAAGCTCAAAAGAACCTTTAGCTATGGTGAAGGAGGAGATTACAAATGATGGATGCAAAGATTCAGGCTTTAATAAGAGTTCGGTTGCACAATGGCCCTTCTCGAACAAAGTCTCTGCTCTCCCACATTTGATGTCTTTTAAGGTTTCTCAAGATGACAAGACCAAGAAGATGGGGTCTGATCCCCTCACATATGCTGGATTTATGGCTATCTCAAATCCGGATGCATTTGATGCTGCTCAAAAGCGCTCTGCTGCTGAAATCCAGAAACCTTTCAATCACGATGGGCAAGGTGGTATTCACTTTTCCCTGACTCCGTATCCTGTACCAAATGATGTGCATTTGCTGAATCGTTCTCAAGATGTGAAGATGTTTTCAGCTCCCAATCAAGCAATTTCTGTTTCCATGGGATACTCTTTCTTGAAGAACCATTTCACCACAGTGGGTCAGCATATGGTTGGTAATGATGTAAAGCAACAGCTGCTAGGGGGTATGCCTGTTACTTTGCCTCATTTAGTCCCCACTGAAATCGGTTCTGTTGCAGCTATGACTGAATCATGTTTGAAGCCATCTGCTCCACCCAGTCAACTCACCATTTTCTATGCTGGTACTGTGAATGTTTTTGATGATATCTCCCCTGAGAAGGCACAAGCTATCATGTTGTTGGCTGCGAATGGGTTACCTGTGACTTCAAACAAGGCACAGCTGAACGTTCAGGCACCAAACTCGAAGCTGACTTCAGGCGAAGGTGTTCCTGTGAGTCATCCTATAAATACATCACCTTGCCCTGGTCTTTCCAGTCCTCTATCTGTGTCTTCACATACAGGCACACAGTCAAGGAGTGGCTCAAGTAGCACTGATGAGCTTCTGGCAGTTAAAACAACTGGAGTTCCCACCACTCTTGTTAGCAAAGTGGAGCCTCCAAAAGTAGTTAATGCAACTGCTATGTTGCCTTCTGCTGTGCCACAGGCTCGTAAAGCATCATTGGCACGGTTTTTGGAGAAGCGCAAAGAAAGGGTGATGAATGCAGCAGCACCATATAACCTAAGCAAGAAATCCGAGGATGTTGCTAATTTCTCTGCAACTACCTCTGCTGGTTCTAATATTCTATCAGCCAAGCAAGCATAG 1149 0.4473 MERDFMGLSSKEPLAMVKEEITNDGCKDSGFNKSSVAQWPFSNKVSALPHLMSFKVSQDDKTKKMGSDPLTYAGFMAISNPDAFDAAQKRSAAEIQKPFNHDGQGGIHFSLTPYPVPNDVHLLNRSQDVKMFSAPNQAISVSMGYSFLKNHFTTVGQHMVGNDVKQQLLGGMPVTLPHLVPTEIGSVAAMTESCLKPSAPPSQLTIFYAGTVNVFDDISPEKAQAIMLLAANGLPVTSNKAQLNVQAPNSKLTSGEGVPVSHPINTSPCPGLSSPLSVSSHTGTQSRSGSSSTDELLAVKTTGVPTTLVSKVEPPKVVNATAMLPSAVPQARKASLARFLEKRKERVMNAAAPYNLSKKSEDVANFSATTSAGSNILSAKQA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci792g0001 382 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 138 360 IPR040390 -
Prci792g0001 382 SMART tify_2 197 232 IPR010399 -
Prci792g0001 382 ProSiteProfiles Tify domain profile. 197 232 IPR010399 -
Prci792g0001 382 MobiDBLite consensus disorder prediction 248 294 - -
Prci792g0001 382 Pfam Jas motif 329 354 IPR018467 -
Prci792g0001 382 Pfam tify domain 199 231 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci792g0001 39 360 Tify Gene Family AT3G17860 35.756 6.58e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci792g0001 tify 6.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci792g0001 K13464 - qsa:O6P43_032516 478.789