Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci781g0001 ATGGGCGTGGACATGTCGAATAACCCATCTCCAACTTCTCACACTAAAGATTTCTTCGCTTCTCCGGCTCTCTCTCTTAGCCTCGCTGGGATTTTCCGAAACAGGGAACCTGCTGTGGCTGCCGGGGCTACCGCGTCCAGCAGGGAGGTGGAGGAGGGGGACGAAGGGAGCGGCGGCGGAGGCGTAGGAGGCCGGCGAGATGAAACAGTGGAGATTAGCAGCGAGAACTCCGGCCACACGAGATCCAGATCGGACGATATTGATTTCGAAGGAGAAGGAGAGCATGACGATGACGATGACGGCGACGGAGACAACAAGAACAAGAAGAAGAAGCGGAAGAAATATCACAGGCACACTGCTGAGCAGATCAGAGAAATGGAAGCGCTTTTTAAAGAGTCACCACATCCTGATGAAAAGCAAAGGCAACAACTTAGCAAGCAACTAGGCCTTGCTCCTAGACAAGTCAAGTTCTGGTTCCAGAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGTCACGAGAATTCATTATTGAAGTCAGAAATCGAGAAACTGAGAGAAGAAAACAAGCAAATGCGAGAGACCATCAACAAAGCTTGCTGTCCCAACTGTGGCATGGCCACCACAAGCAGAGACTCCGTCATGTCCACCGAAGAACAACAACTTCGCATCGAAAACGCCAAACTCAAAGCCGAGGTGGAGAAGTTAAGAGCAGTAATAGGGAAGTACCCGCAAGGGACGGCGTCTCCGTCGTGTTCAGGAGGGAACGAGCAAGAGAACAGAAGCTCGTTGGATTTCTACACTGGCATATTTGGGCTGGACAAGTCCAGGATCATGGAGATTGTGAATCAGGCCTTGGACGAACTGGTCAAAATGGCCACTGTGGGAGAGCCGTTGTGGGTTCGGAGCTTGGAGACTGGTCGGGAAATTCTCAACTATGATGAGTACGTGAAGGAGTTCGCGTCTTCTTCAGGTCAAGGTTCGAGCCATGCAAGGCCCAAAAGATCCATTGAAGCTTCCAGAGAAACTGGGGTTGTTTTTGTTGATCCCCCTCGCCTCGTTCAGAGATTCTTAGATGTGAATCAGTGGAAGGAGATGTTTCCATGGTTGATATCAAAAGCAGCAACTGTAGATGTCATCTGCAGCGGAGAAGGGCCTCACAGGAATGGTGCGGTTCATCTGATGTTCGCAGAGGTGCAAATGCTAACACCAATGGTGGCCACAAGAGAAGTGTATTTCGTGAGGTACTGCAAGCAACTAAGCGCAGAGCAGTGGGCGGTCGTGGACGTCTCCGTCGACAAGGTTGAAGACAACATCGATGCCTCCCTCGTGAAATGTCGAAAACGCCCCTCTGGCTGCATTATTCACGACAAGTCTAACGGCCATTGCAAGGTAACCTGGGTGGAGCACTTGGAATGCCAGAAGAGCACAGTCCACACAATGTACCGCACCATAGTTAACAGTGGCATGGCTTTTGGTGCAAGGCACTGGGTTGCCACCCTCCAACTTCAATGTGAACGTCTCGTTTTCTTCATGGCCACAAATGTTCCCATGAAGGATTCAACTGGTGTTGCCACGTTAGCAGGAAGGAAGAGCATTTTGAAGCTTGCCCAGAGAATGACAAGTAATTTCTGCCACGCTGTCGGAGCTTCAAGCTTCCATACATGGACCAAGGTTACCAGCAAAACAGGGGAAGACATCAGAATAAGTTCTAGGAAGAATTTGAATGATCCTGGGGAACCTCTAGGGGTGATCTTGTGTGCTGTTTCTTCTGTGTGGCTGCCAGTTTCTCCTAACGTTCTGTTTGATTTCTTGAGGGATGAAACTCGCAGATCTGAGTGGGATATCATGTCCAATGGTGCATCAGTGCAATCCATAGCAAACTTGGCCAAGGGACAGGATCGAGGCAATTCAGTAACCGTCCAAACAATTAAATCAAAAGATAACAGCATGTGGGTTCTGCAAGATAGCTGCACAAATGCATATGAATCGCTGGTGGTGTATGCTCCAGTGGACATCCCAGGGATTCAGTCTGTGATGACAGGATGTGACTCTAGCAATCTAGCCATACTTCCCTCAGGCTTTTCCATACTCCCTGATGGGTTGGATGCAAGGCCATTGGTCATAACTTCAAGAGAGGAAGAGGGAAACACAGAAGGAGGGTCTTTGCTCACAGTGGCTTTCCAGGCCCTTACTAATACATCTCCTACAGCTAAGTTAACTATGGAGTCTGTGGAATCTGTCAACACTCTTATATCTTGTACATTAAGAAATATCAGAACCAGCTTACAATGTGAGGATGGTTGA 2307 0.4898 MGVDMSNNPSPTSHTKDFFASPALSLSLAGIFRNREPAVAAGATASSREVEEGDEGSGGGGVGGRRDETVEISSENSGHTRSRSDDIDFEGEGEHDDDDDGDGDNKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLREENKQMRETINKACCPNCGMATTSRDSVMSTEEQQLRIENAKLKAEVEKLRAVIGKYPQGTASPSCSGGNEQENRSSLDFYTGIFGLDKSRIMEIVNQALDELVKMATVGEPLWVRSLETGREILNYDEYVKEFASSSGQGSSHARPKRSIEASRETGVVFVDPPRLVQRFLDVNQWKEMFPWLISKAATVDVICSGEGPHRNGAVHLMFAEVQMLTPMVATREVYFVRYCKQLSAEQWAVVDVSVDKVEDNIDASLVKCRKRPSGCIIHDKSNGHCKVTWVEHLECQKSTVHTMYRTIVNSGMAFGARHWVATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTSNFCHAVGASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPLGVILCAVSSVWLPVSPNVLFDFLRDETRRSEWDIMSNGASVQSIANLAKGQDRGNSVTVQTIKSKDNSMWVLQDSCTNAYESLVVYAPVDIPGIQSVMTGCDSSNLAILPSGFSILPDGLDARPLVITSREEEGNTEGGSLLTVAFQALTNTSPTAKLTMESVESVNTLISCTLRNIRTSLQCEDG 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci781g0001 768 ProSitePatterns 'Homeobox' domain signature. 144 167 IPR017970 GO:0000981|GO:0006355
Prci781g0001 768 CDD START_ArGLABRA2_like 275 506 - -
Prci781g0001 768 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 108 763 IPR042160 -
Prci781g0001 768 SMART START_1 280 507 IPR002913 GO:0008289
Prci781g0001 768 MobiDBLite consensus disorder prediction 1 20 - -
Prci781g0001 768 CDD homeodomain 116 167 IPR001356 GO:0003677
Prci781g0001 768 ProSiteProfiles START domain profile. 271 510 IPR002913 GO:0008289
Prci781g0001 768 SUPERFAMILY Bet v1-like 536 753 - -
Prci781g0001 768 Pfam START domain 281 507 IPR002913 GO:0008289
Prci781g0001 768 Coils Coil 219 239 - -
Prci781g0001 768 Gene3D - 99 182 - -
Prci781g0001 768 MobiDBLite consensus disorder prediction 39 120 - -
Prci781g0001 768 ProSiteProfiles 'Homeobox' domain profile. 109 169 IPR001356 GO:0003677
Prci781g0001 768 SUPERFAMILY Homeodomain-like 100 170 IPR009057 -
Prci781g0001 768 Coils Coil 168 198 - -
Prci781g0001 768 FunFam Homeobox-leucine zipper protein GLABRA 2 280 506 - -
Prci781g0001 768 Pfam Homeodomain 112 167 IPR001356 GO:0003677
Prci781g0001 768 SUPERFAMILY Bet v1-like 273 507 - -
Prci781g0001 768 Gene3D - 285 504 IPR023393 -
Prci781g0001 768 FunFam Homeobox-leucine zipper protein HDG1 96 185 - -
Prci781g0001 768 MobiDBLite consensus disorder prediction 68 89 - -
Prci781g0001 768 SMART HOX_1 111 173 IPR001356 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci781g0001 72 767 Homeobox Transcription Factor Family AT1G79840 65.957 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci781g0001 START 2.6e-58 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci781g0001 K09338 - qsu:111988083 1225.69