Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci77g0004 ATGGTTTTGGGAGGACTACAAGGTAACTGTATGGTTTTCTTCTCTCATCAACGAATTACTTCTCCATTTAAAACAGGTGGGCTCTCACTTAATAGAATTGCTGTATGTTTTGATAGGAGGTTTCAAGGTAATTCTTTTGAAGGCCCAATACCATCTTCATTTAGCAATCTGACTTCTCTCGAAGAGTTGAGAATAAGTGACATATCTAATGGGAGTTCCTCACTGGCATTTATAAGGAACATGAAGTCCTTGACTACCTTAGAACTGAGGAATAACAAAATTTCTGATTCAATTCCATCCAATATTGGTGAATTTCTCAATTTGACCCATCTAGATTTGAGCTTCAATAACATCACGGGACAGATTCCAGAGTCACTTTTCAATATGAGTTCATTATTATACTTGTTTCTTGGAAATAACAGCCTCAGTGGCACTATCCCAACCCTGATAAGCCCGTCTCTTCTCACTGTAGACTTGTCCTACAACAGTCTATCAGGGAGCCTCCCTTCTTGGGTAAACCTGCCAAATTTACAAATCAATTTGGTTGCTAATAACCTGAAAATAGAAACTTCAAATAGCAGTGGTCTTCCTGAAGGTCTCTACTGCTTGCAACAAAATTTTCCTTGCAATCGTGGTCCTGGAATATATTATGACTTTGCAATCAAGTGTGGTGGTAATTCAACTACAACATCAGATGGAATGGTGTATGAAAGTGATAATGAGGCACTTGGTCCTGCTACTTATTTTGTTACTGATACAGAAAGATGGGCAGTTAGCAATGTTGGGGTATTTACTTTTTCCAACAATAATCCATACACAAGTCTGGTGTCTACTGATTTCACTGGTAGTTTGGACCAAACCCAGTCAGCCCGGCTCTCTCCTTCTTCATTAAGGTATTATGGTCTGGGACTGGAAAACGGGAATTACAACATCTCCCTCTTTTTCACAGAAACATCAATACCTAATCCAGGTGCTTCTGCTTCATGGAGAAGTCTTGGAAGACGGGTCTTTGATATATATATCCAGGGGAATCTTGTTTTGGAGGATTTTAGTATACAAAAGGAGGCAGAGAAGGGCTCTATTAGTGCTGTCAAAAAAGATTTTCAGGCTCGTGTATCAGAAAACTATCTTGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCAGCTCAAGGTTCTTATGGTCCTCTTATTTCAGCAATTAGAGCTACCCCAGATTTCACTCCCACTGTCAGCAATAAACCTCCTAACAGTGAAAATGACAAACCTCCTGCCAGTGAAATTGACAATCCTCCAACCAGTAAAAGGAACAGAACAGGTTTGATAGTGGGACTTGTTGTTGGTATTGGAGTTGTAGGCTTTCTGTCTGTCCTTGTCGTTTTCTGTATCATTCAGAAAAGAAAGCATCATGGAGATAGTGAAGAGCTTTTAGGTATTGATATAAAGCCATACACTTTCAACTATTCTGAGTTAAAGAATGCTACAGATGACTTCAATCCTGGCAATAAACTTGGAGAGGGAGGTTTTGGACCAGTTTTTAAGGGAACACTTAATGATGGAAGAGTAATTGCTGTGAAACAATTATCTGTAGGATCTCATCAAGGAAAGAGCCAGTTCATAGCTGAGATAGCTATTATATCTGCCGTGCGACATCGTAATCTTGTTAAACTCTCTGGATGTTGCATTGAAGGAAACAAAAGACTTCTTGTTTATGAGTATCTTGTAAACAGGAGTCTTGATCAAGCTTTGTTTGGAAATTGTTTAACTCTCAATTGGCCCACACGCTATGATATCTGCATGGGTATAGCAAGAGGTTTAGCTTATTTGCATGAAGAGTCTCGGCCACGTATTGTGCACCGTGATGTAAAAGCTAGTAATATTCTGCTTGATCATGAGCTTATCCCTAAAATATCTGATTTTGGTTTAGCCAAATTATATGATGATAAAATGACCCATATAAGCACCCATGTAGCTGGGACAATTGGTTATCTTGCTCCAGAGTATGCCATGCGTGGGCGCCTTACCGAGAAAGCAGATGTGTTTTCTTTTGGTGTTTTGGCCCTAGAGATAGTTAGTGGGAGGCCAAACTCTGATTCAAGCTTGGAAGAAGAGAAGATGTATCTTCTAGAATGGGTTTGGCAGCTGCATGAAAACAACTGTATTGTCGAACTGGTAGATCCTAGACTATCATCAGATTTCAATGAGGAAGAAGTCAATCGAATGGTAGGGATATCTCTTCTCTGCACTCAGTCATCACCATTGTTAAGGCCAGCAATGTCCCGTGTTGTGGCAATGCTTTCTGGGGATATTGAAGTCAGCACTGTAACTTCAAGGCCTGGATACTTGACAGGCTGGCAATTTGATGATATGAGCAGCTTCATGACTAGCTTGGTCACAAAGGAATCAGATATAAGTCAACACAACTCATTAAGTGCCAGCAGATGGAGTACTGAAAACCAATCACCTGTAGATGCTTCTAAACCCATCCTTCATCACAATCCAAGTTAA 2517 0.4017 MVLGGLQGNCMVFFSHQRITSPFKTGGLSLNRIAVCFDRRFQGNSFEGPIPSSFSNLTSLEELRISDISNGSSSLAFIRNMKSLTTLELRNNKISDSIPSNIGEFLNLTHLDLSFNNITGQIPESLFNMSSLLYLFLGNNSLSGTIPTLISPSLLTVDLSYNSLSGSLPSWVNLPNLQINLVANNLKIETSNSSGLPEGLYCLQQNFPCNRGPGIYYDFAIKCGGNSTTTSDGMVYESDNEALGPATYFVTDTERWAVSNVGVFTFSNNNPYTSLVSTDFTGSLDQTQSARLSPSSLRYYGLGLENGNYNISLFFTETSIPNPGASASWRSLGRRVFDIYIQGNLVLEDFSIQKEAEKGSISAVKKDFQARVSENYLEIHLFWAGKGTCCIPAQGSYGPLISAIRATPDFTPTVSNKPPNSENDKPPASEIDNPPTSKRNRTGLIVGLVVGIGVVGFLSVLVVFCIIQKRKHHGDSEELLGIDIKPYTFNYSELKNATDDFNPGNKLGEGGFGPVFKGTLNDGRVIAVKQLSVGSHQGKSQFIAEIAIISAVRHRNLVKLSGCCIEGNKRLLVYEYLVNRSLDQALFGNCLTLNWPTRYDICMGIARGLAYLHEESRPRIVHRDVKASNILLDHELIPKISDFGLAKLYDDKMTHISTHVAGTIGYLAPEYAMRGRLTEKADVFSFGVLALEIVSGRPNSDSSLEEEKMYLLEWVWQLHENNCIVELVDPRLSSDFNEEEVNRMVGISLLCTQSSPLLRPAMSRVVAMLSGDIEVSTVTSRPGYLTGWQFDDMSSFMTSLVTKESDISQHNSLSASRWSTENQSPVDASKPILHHNPS 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci77g0004 838 Gene3D Transferase(Phosphotransferase) domain 1 577 780 - -
Prci77g0004 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Prci77g0004 838 ProSiteProfiles Protein kinase domain profile. 501 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci77g0004 838 Pfam Leucine Rich repeat 107 120 IPR001611 GO:0005515
Prci77g0004 838 Pfam Leucine Rich repeat 82 97 IPR001611 GO:0005515
Prci77g0004 838 SMART serkin_6 501 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci77g0004 838 SUPERFAMILY Protein kinase-like (PK-like) 484 795 IPR011009 -
Prci77g0004 838 FunFam Leucine-rich repeat receptor-like protein kinase 216 408 - -
Prci77g0004 838 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 40 804 - -
Prci77g0004 838 MobiDBLite consensus disorder prediction 812 838 - -
Prci77g0004 838 SUPERFAMILY L domain-like 42 189 - -
Prci77g0004 838 ProSiteProfiles Leucine-rich repeat profile. 107 129 IPR001611 GO:0005515
Prci77g0004 838 Gene3D - 217 408 - -
Prci77g0004 838 Pfam Malectin domain 218 404 IPR021720 -
Prci77g0004 838 MobiDBLite consensus disorder prediction 411 437 - -
Prci77g0004 838 MobiDBLite consensus disorder prediction 411 427 - -
Prci77g0004 838 FunFam Putative LRR receptor-like serine/threonine-protein kinase 577 781 - -
Prci77g0004 838 FunFam Leucine-rich repeat receptor-like protein kinase 470 576 - -
Prci77g0004 838 Pfam Protein tyrosine and serine/threonine kinase 504 768 IPR001245 GO:0004672|GO:0006468
Prci77g0004 838 Gene3D Ribonuclease Inhibitor 14 216 IPR032675 -
Prci77g0004 838 Gene3D Phosphorylase Kinase; domain 1 463 576 - -
Prci77g0004 838 MobiDBLite consensus disorder prediction 812 829 - -
Prci77g0004 838 FunFam Putative LRR receptor-like serine/threonine-protein kinase 71 194 - -
Prci77g0004 838 CDD STKc_IRAK 507 769 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci77g0004 40 808 Receptor kinase-like Gene Family AT1G56120 60.673 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci77g0004 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci77g0004 - - gmx:100780567 1124