Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci778g0005 ATGTCAACACTCAACCATCTTTTTGGCCTTCCAGAGCAAATATGTTACGTTCAATGTGGATTCTGTACCACCATTTTAATGGTGAGCGTCCCATGCAGCAGTTTGTCTATGGTGGTGACAGTCAGATGTGGACATTGCACAAGCCTCCTCTCTGTTAATATGATGAAAGCTTCTTTTGTCCCCTTTCACCTTTTAGCTTCCTTTACTCATCTTCAGCCAAAAGAGGGAAGTCCAGAAGAGGAAGCAAGCAAGACTTTGGACAGCCATAATCATAATGGATCCATGATGACCTATTCTGATTGTGAGGAGGAAGGGGACGCGATTCCTATGAGTATTGTCGTAAATAAACCCCCAGAGAAGAGACAGAGAACACCATCAGCTTATAACCGATTCATCAAAGAGGAGATTAGAAGGCTAAAGGCTGAAAATCCAGACATGGCTCACAAGGAAGCTTTTAGCACAGCTGCAAAAAATTGGGCCTGCAAAGGAGATGAAGAAAGCTGCAGCCAGACAGAGCAACTTGTGGATCTTGACTGTCATGAAGATGCTGAGGTTAAAGAAGAAGAAGAAGAGGAAGGCCAAGGTTACCGTGAAAGAAAGGTTCCAAGGAATTCCATCTGGGCAAGGACACCATTTGAGTGA 642 0.4408 MSTLNHLFGLPEQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPFHLLASFTHLQPKEGSPEEEASKTLDSHNHNGSMMTYSDCEEEGDAIPMSIVVNKPPEKRQRTPSAYNRFIKEEIRRLKAENPDMAHKEAFSTAAKNWACKGDEESCSQTEQLVDLDCHEDAEVKEEEEEEGQGYRERKVPRNSIWARTPFE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci778g0005 213 Pfam YABBY protein 11 160 IPR006780 GO:0007275
Prci778g0005 213 MobiDBLite consensus disorder prediction 190 204 - -
Prci778g0005 213 SUPERFAMILY HMG-box 114 166 IPR036910 -
Prci778g0005 213 CDD HMG-box_SF 123 166 - -
Prci778g0005 213 MobiDBLite consensus disorder prediction 73 93 - -
Prci778g0005 213 Gene3D High mobility group box domain 114 205 IPR036910 -
Prci778g0005 213 MobiDBLite consensus disorder prediction 183 213 - -
Prci778g0005 213 PANTHER PROTEIN YABBY 6-RELATED 3 161 IPR006780 GO:0007275
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci778g0005 2 213 C2C2-YABBY Transcription Factor Family AT1G23420 55.895 3.19e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci778g0005 YABBY 1.3e-61 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci778g0005 K25796 - qsa:O6P43_025277 326.25