LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci776g0001	ATGAGCAAATCTAGGGTCCACAAGAAACTCACCAAGCAAGCCATTGCCGATCAGAACCAAAAGCCGCAGAAATCAGAGAAACAACCGTCTTGGGTGGTGGTGAGAGGCCTATTGACCTGTAGAAACGTTCAAACCCAGCAGCAGCAGAAGCAGCCGCAACAGATTCCTGAAGGGAAACAACAGCCGAAGAAGAAACAAGAACAGCGAAAGTTGCAAGAAGAAAGAGTCCCAGAAGATCAGAACGGCAAGAAGTGCAAGAAGATGAAATGTTCAGGCTCGCTTTGTAATAACACCAATATCATGGCTAGGCCTGAAACGGGATGCCCTGATGCCCACAACAAAAAGGCCTCACTGTCTGCATGTAGCGGCAGCAACAATGATGGTTCAAGCAGATCCATGAAAGCTCCTCCTCGAGAACCAAACACCGCTGTTTTAGCATCTTCTTCTTCATTGTCAGCATCTTCTAGTTCTTCTGTTAGCGGGTCTTTCAAGGGAATGCCCTTCAGGAGACTCTCTGGTTGTTACGAGTGCCGAATGGTGGTTGACCCTGTTCTGGGTTTCACCAGAGACCCTTCTCTCCGGAGTAGCATTTGCTCATGCCCAGATTGTGGTGAGATCTTCATGAAAGCTGAAAGCTTGGAGCTTCATCAGGCTGTTAAACATGCAGTGTCGGAACTGGGTCCCGAAGATACAAGCAAGAATATAGTAGAAATCATATTCCATTCAAGCTGGCTAAAGAAACAGTCCCCAGTCTGCAAAATAGATCGCATCCTTAAAGTCCACAACAACCAGAAGACGATTTCCAGATTTGAAGAATATAGAGACACCATAAAAGCCAAAGCCACAAAGCTCCCCAAGAAACACCCACGTTGCATAGCAGATGGCAACGAGCTGCTCAGGTTTCACGCAACCACCTTCGTCTGCTCTCTGGGCCTAAACGGTTCGTCTAACCTCTGTAACTCAATGCCTCAGTGCAACGTTTGCAACATAATAAAGAACGGATTCAAGGTCGCCGTAGAAACGAACGGAGGAAACGACGGGACGGGAATATTGACGACGGCGACGAGCGGGAAGGCACACGACAAAGCTGTGGTTTCAGCGGACGAGAACAACGACATTAGGGCGATGCTGGTTTGTCGGGTAATAGCTGGCAGGGTGAAGAAGAATGTGGAAGGAAGCATGGAGGAGTATGATTCCATGGGAGGGGGTGTCGGGGCGTACTCTAACTTGGACGAGTTGTATGTGTTCAATCCAAGAGCTATATTGCCTTGTTTTGTTGTGATCTACAGAGGATTTTGA	1299	0.4796	MSKSRVHKKLTKQAIADQNQKPQKSEKQPSWVVVRGLLTCRNVQTQQQQKQPQQIPEGKQQPKKKQEQRKLQEERVPEDQNGKKCKKMKCSGSLCNNTNIMARPETGCPDAHNKKASLSACSGSNNDGSSRSMKAPPREPNTAVLASSSSLSASSSSSVSGSFKGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICSCPDCGEIFMKAESLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNNQKTISRFEEYRDTIKAKATKLPKKHPRCIADGNELLRFHATTFVCSLGLNGSSNLCNSMPQCNVCNIIKNGFKVAVETNGGNDGTGILTTATSGKAHDKAVVSADENNDIRAMLVCRVIAGRVKKNVEGSMEEYDSMGGGVGAYSNLDELYVFNPRAILPCFVVIYRGF	432

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci776g0001	432	FunFam	C2H2-like zinc finger protein	222	430	-	-
	Prci776g0001	432	ProSiteProfiles	Zinc finger C2H2 type domain profile.	198	226	IPR013087	-
	Prci776g0001	432	MobiDBLite	consensus disorder prediction	13	27	-	-
	Prci776g0001	432	PANTHER	C2H2-LIKE ZINC FINGER PROTEIN	83	429	-	-
	Prci776g0001	432	MobiDBLite	consensus disorder prediction	44	87	-	-
	Prci776g0001	432	ProSitePatterns	Zinc finger C2H2 type domain signature.	198	221	IPR013087	-
	Prci776g0001	432	MobiDBLite	consensus disorder prediction	60	86	-	-
	Prci776g0001	432	MobiDBLite	consensus disorder prediction	44	59	-	-
	Prci776g0001	432	MobiDBLite	consensus disorder prediction	1	30	-	-
	Prci776g0001	432	MobiDBLite	consensus disorder prediction	117	159	-	-
	Prci776g0001	432	SUPERFAMILY	ADP-ribosylation	223	431	-	-
	Prci776g0001	432	Gene3D	-	222	430	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci776g0001	163	430	C2H2 Transcription Factor Family	AT1G75710	53.925	2.57e-101	308

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Prci776g0001		None	None	None