Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci772g0004 ATGGGCGGGATCGGTAAGTCAACTCTTGCTCATGTTGTCTATGACAGATTGAGAAACCAATTTGAAATTAGTTGTTTCCTTGGCAATATAAGGGGGTTTTGTGAAAGATATGATGATGATAGCCATCTTCGCTTACAAAAGAAGCTTCTTTCACGTCTTAACATGAAAGGAATGGTAATTGAAAATACATATCAAGGAAAGAACAAAATCCGAGACCTTTTTCGTAATGGAAAGGTTCTTCTTGTCCTTGATGATATAAGTTCCATTAGTCAATTAGAGAATTTGGCAGAAAGCAAAGACTGGTTTGGTAATGGTAGTAGAGTGATTATTACAACTAGAGATGTCCAATTGTTGGCATCACATGGAGTGGATAATACTTATAAGGTTGAAATCTTGAACAATGAAGAATCACTTGGACTCTTTTCAAGCAAAGCTTTCAGAAGTGATCAACCTAGAGAGGGATATTTGGAATTGTCCACATCCATGGTTGATTATGCTGGGGGCCTTCCTTTAGCACTAAAAGTTTTGGGGTCCTTTCTTTATGGAAAAAGTGCACTTGAATGGAGAGATGCTTGGGACAAATTGGAGCAAGTTTCACATGATGATACTCTTAAGATACTTAAAATAAGTTATGAAGGGTTAGATGAGGAAGAAAAGACAATATTTTTGGATATCGATTGCATTTTTAAGGGATGGGACAAAAATAAAGTGATGCAAATATTGATAAATTGTGGTCTTCATGGAATGGAAGTAATCCAAGGGATAGTTTTAAAGGAAGGAAAGCCATGTGATGTAGATTGGGATCTTGAAGCCTTTTCAAGAATGTGTGACCTTAGATTACTTATTATATCAAGTAATTTGAACCTTTCACATGGCCTCAAATGCCTTCCTAGCGCCTTGAAAGTTCTTCGATCGAAGGAATATCCTCTTGACACTCTTCCTCCTGGAAGCCAGCTAGATCAACTTTGCTTGAAGAATCTAATGCTTTTGGACTTGAGTCATTCTACGTACTTAATTAAAACGCCCAATTTCTTGGATCTTCCAAATCTGGAAAAATTAAAACTTGAAGGTTGTGTAGATCTTGTTGAGCTTCATCCTTCACTTGGTGAGCACAAAAAGCTTCTTGCGTTGAATTTGAAAGGCTGCGAAAAACTTAAAGTCCTTCCACAAAATTTGGAAATGACTTCTCTCAAGGAATTTATTTTAGAAGAAACTGGCATAGAAGAAGTGCCTGCTTCGCTTGGACTTTTGACAAGCGTTGAAGTGTTAAATCTAAGAGGTTGCAAGCATCTTAAATCCCTCCCAAAAAGGTTGGAAATGACTTCTCTAAAGGAATTTGTTCTTTGCGGATGCAATCAAGTAAAAAATCTTCCTGAGTTTAATGAAGACATGACAAATCTGGTTAAACTTGATATTGGGGAGACAAATGTGGTCGATCTTCCTGAGTCACTTGGATTATTGACTAGTCTTGAATCTTTGAATTTGAGGCATTGCAAGAATCTTGTTTTCCTTCACCATAACATTAAAAAATTGAAACATCTCAAGGTTCTTGATATTTCTGGATGCTCAAAGTTTTCGAGGTTGGCAGATAACTTGAATGAAAATGAAGCCTTGGAGGAGCTTGATGTAAGTGGAACAGCTATAACAGAAGTACCTTCTTGCATTGGGCAAATGAAAAATGTGAGAACAACGTCATTCCATGGATGCAAAGGACCAGAGTCTAAATTGTGGATCTCATTATCATCTCCTACGGGCTTAACATTGCCTAATTCTGTCTTCAATCTTAAGTCACTAAGAAAATTAGATTTAAGCTATTGTGATATTGGTGATGGATCTATTCCAAATGATCTTGGAGGCTTATCATCACTAGAGAGATTAGATCTTAGTGGGAACAAGTTTGTGAATCTACCTTCTGGATGCATTTCTAATCTTATGAAACTATATTTCCTTTGTTTGCATTCCTGCCCAAGACTTCAGTCATTGCCACAACCTTCACCAGATTTAGATACAATTGATGGAGGAGAATGTGCTTCATTGGAAAACTTGTCAAATGAAAAAATATTACGTCTCTTTCATTTAATTGGACAGCCTCGCACATATGCTCACCGATGGGGATTTTCGGTTTATAACTTCGGAGCCACCATTCCAGGCAAAGAAATGCCATCATTGTTTGAGAACCAAGAGTATCTTTCATTGAATGAGAAACTTGAAGCTTCAATAATAATTGACATTCCTCCATCTGACTTGTTTGGATTTGTGCTGTGCACTGTGCTAGCTGATGATATGTTTTATTCCACTGATGAGCCAAACCAAAAACAAATCGGTTGGCTTATTTGGTCGTTTGACTTTGTTGAAGCTTGCAATAATGGTGGATTTAGATTTGTACCAATTGAAGGTAGGAGTCGCCTGAACGAGAAAGGAATAAAATCTCCTCACCTTTGGATCGTTTTTGGGCAGATCAGTGACCAAATCGATCATGAAAAATCAAGGAATTGCAGCCAGATTCGCTTGAGATTTCAGGCTCCTGAGACTCAACCTCTATTAAAATTGGATGGAAAAATCATTAAGTGTGGATGGCGTGCCATCCGCAAAGGTCATTTTGGAAAGCTAGTCAAATCAATGGGTGATGTGCACAATGATGAAGAAAATACAAGGTGTTTTGATGTTGAAGAGCAAGGACAGAGCAATTTATCCATAAGTGAGAACTCTCAAACCATAATCAATGAATGTGAAACCAAGTCTCCAAAGCCATCTTTTCTAAGCTTAGAAGAGGAAGGAAAATCAGATGATTCGCGGATGCAATTCATTATTGACGATGCAAGCACTGGTCTTTGCGATTTTCCTCTCCACATTGCAAGCCCAGCCACTGCGAATGCAACGTCACTCCCCATTGTTGAGCCAAATGACAATCTGATTTCTGAGAATTTTTTAAGGAAGAGAAACCAAGCTAATGCTATATCCAAGGATTACACTCCACAAACAAGTGCCGAGGAGATATTTGAAGAACTTGAGAAAGTTTTACACTCGGAAGACACTGATGAGTTGCTGCAAATTTATGACATACTTACGACTGATGAAAGAAAATACGAGTCATTTAAGGCTCTTCCCACCAGATTAAGAAAACCATGGATTTTAATGCAAATTGGAAAGAAAAAAAGTGCTTCATAA 3168 0.3772 MGGIGKSTLAHVVYDRLRNQFEISCFLGNIRGFCERYDDDSHLRLQKKLLSRLNMKGMVIENTYQGKNKIRDLFRNGKVLLVLDDISSISQLENLAESKDWFGNGSRVIITTRDVQLLASHGVDNTYKVEILNNEESLGLFSSKAFRSDQPREGYLELSTSMVDYAGGLPLALKVLGSFLYGKSALEWRDAWDKLEQVSHDDTLKILKISYEGLDEEEKTIFLDIDCIFKGWDKNKVMQILINCGLHGMEVIQGIVLKEGKPCDVDWDLEAFSRMCDLRLLIISSNLNLSHGLKCLPSALKVLRSKEYPLDTLPPGSQLDQLCLKNLMLLDLSHSTYLIKTPNFLDLPNLEKLKLEGCVDLVELHPSLGEHKKLLALNLKGCEKLKVLPQNLEMTSLKEFILEETGIEEVPASLGLLTSVEVLNLRGCKHLKSLPKRLEMTSLKEFVLCGCNQVKNLPEFNEDMTNLVKLDIGETNVVDLPESLGLLTSLESLNLRHCKNLVFLHHNIKKLKHLKVLDISGCSKFSRLADNLNENEALEELDVSGTAITEVPSCIGQMKNVRTTSFHGCKGPESKLWISLSSPTGLTLPNSVFNLKSLRKLDLSYCDIGDGSIPNDLGGLSSLERLDLSGNKFVNLPSGCISNLMKLYFLCLHSCPRLQSLPQPSPDLDTIDGGECASLENLSNEKILRLFHLIGQPRTYAHRWGFSVYNFGATIPGKEMPSLFENQEYLSLNEKLEASIIIDIPPSDLFGFVLCTVLADDMFYSTDEPNQKQIGWLIWSFDFVEACNNGGFRFVPIEGRSRLNEKGIKSPHLWIVFGQISDQIDHEKSRNCSQIRLRFQAPETQPLLKLDGKIIKCGWRAIRKGHFGKLVKSMGDVHNDEENTRCFDVEEQGQSNLSISENSQTIINECETKSPKPSFLSLEEEGKSDDSRMQFIIDDASTGLCDFPLHIASPATANATSLPIVEPNDNLISENFLRKRNQANAISKDYTPQTSAEEIFEELEKVLHSEDTDELLQIYDILTTDERKYESFKALPTRLRKPWILMQIGKKKSAS 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci772g0004 1055 Gene3D Ribonuclease Inhibitor 394 574 IPR032675 -
Prci772g0004 1055 Gene3D Ribonuclease Inhibitor 575 697 IPR032675 -
Prci772g0004 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 225 IPR027417 -
Prci772g0004 1055 Gene3D - 1 125 IPR027417 -
Prci772g0004 1055 Gene3D Ribonuclease Inhibitor 265 393 IPR032675 -
Prci772g0004 1055 Gene3D - 131 215 IPR042197 -
Prci772g0004 1055 PRINTS Disease resistance protein signature 166 180 - -
Prci772g0004 1055 PRINTS Disease resistance protein signature 73 87 - -
Prci772g0004 1055 PRINTS Disease resistance protein signature 509 525 - -
Prci772g0004 1055 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 434 672 IPR044974 GO:0006952
Prci772g0004 1055 Pfam NB-ARC domain 1 209 IPR002182 GO:0043531
Prci772g0004 1055 SMART LRR_typ_2 394 417 IPR003591 -
Prci772g0004 1055 SMART LRR_typ_2 536 558 IPR003591 -
Prci772g0004 1055 SMART LRR_typ_2 347 371 IPR003591 -
Prci772g0004 1055 SMART LRR_typ_2 595 619 IPR003591 -
Prci772g0004 1055 SMART LRR_typ_2 620 643 IPR003591 -
Prci772g0004 1055 SMART LRR_typ_2 464 487 IPR003591 -
Prci772g0004 1055 SUPERFAMILY RNI-like 324 659 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci772g0004 1 569 WRKY Transcription Factor Family AT5G45050 27.134 1.99e-39 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci772g0004 - - pcin:129298337 2081.6