Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci762g0005 ATGGACTCTATCAAGTCCTTCAAGGGCTACGGTAAGGTAGATGAGCTCGACCAGAGAGCTTTCCAGAAGAAGACACGTCGCCGCCTCATTATCCTCGGCATTTCTTGCATTCTCCTCGTCGCCGTCGTCGCCGCAGTTGCAGCCACCGTCATTCATAGGCGCGGCCGCTCTTCCTCTTCCTCCGACTACGTCCCTCCCACCGAGTTGACTCCGGCGTCGTCCCTCAGAGCCGTCTGCGCTGTCACTCAGTACCCCAGCTCGTGCTTGTCCAGCATCTCGTCCCTCCATAATTCTAACACTACCGATCCGGAGCTTCTCTTCAAGCTCTCTCTCCGAGTCGCCGTTGACGAGCTCTCCAATCTTTCGAAGCTCCCTTCCAAGCTCAAAGCCAATGTGAAGGATCCGCGGGTTCAGAAGGCGATCGAGGTGTGCGGAATTGTGTTCGACGACGCGGTGGATCGACTCAACGAGTCGATCTCATCGCTTGACGGCGGCGGAAACGGCGGGAAGATCCTTTCGCCGTCGAAGATCGGTGACGTTGAGACGTGGCTGAGCGCTGCGATTACGTACCAGGAGACCTGTCTGGACGCTCTGGAAGAGTTGAATTCCACAGCCGCAAGCGAGATTCTCGAGGATCTGAAAACCGCGATGAAGAACTCAACCGAGTTCGCAAGTAATAGCTTGGCCATTGTGACCAAGATTCTAGGCCTTCTCTCGAATTTCAACTTCCCGATCCATCGGAGGCTACTGGGATTCGGGGGATCCGATTCCGGTTTTCCGGATTGGCTTGGCCCGGCAGAGAGGAGGTTGTTGGAGAATACTAACGCAACGGCGCCGCATGCGGTGGTGGCAAAAGATAACAGCGGGCGATATAAGACGATAAAGGAAGCGTTGGCGGCCGTGAAGAAGAAGAGCGTAACGAGGTTTGTGATTCATGTGAAGGAAGGGGTTTACAAAGAGAATATCGATTTGGATAAGAACACTTGGAATGTGATGATATACGGTGATGGCAAGACCAAGACCATCATCTCCGGCAACCTGAACTTCATCGACGGCACGCCTACCTTTTCAACTGCTACTTTCGCTGTCAAGGGAAAGGGATTCATCGCCAAGGACATAGGATTCATCAACACCGCCGGAGCAGCGAAGCACCAGGCGGTGGCGTTCCGCTCAGGCTCTGACCGATCCGTGTTCTTCAGGTGCTCTTTTGACGGCTTCCAAGACACTCTCTACGCCCACTCCAACCGTCAATTCTACCGAGAATGCGACATCACCGGCACAATCGACTTCATCTTCGGTAATTCCGCCGTCGTCTTCCAGAACTGCAACATCAAGCCGAGACAACCCTTACCAAATCAATTCAACACTATCACGGCTCAGGGCAAAAAGGATCCTAACCAGAACACGGGTATAATCATCCAGAAATCCTCGATCTCTGCGCTTGACAATCTCAACGCTCCGACGTACCTTGGCCGACCGTGGAAGGAGTACTCCACTACGGTGATTATGCAGTCTGATATAGGGTCATTCTTGGATCCAGCGGGCTGGAAAGAATGGGTTTCGGGCGTGGAGCCCGCGAGAACCATATTCTACGCGGAATACAAGAATTCGGGAGCCGGGTCGGGCGTGGATAATAGGATCAAATGGGCGGGTTATAAGTCGCGCCTATCGGACGATGAGGCAGCGAAGTTCACGGTTCAGTCTTTTATCCAAGGAAGTGACTGGTTGCCAGATGCCGCTGTGGAGTTCGAATCCACATTGTAA 1764 0.5346 MDSIKSFKGYGKVDELDQRAFQKKTRRRLIILGISCILLVAVVAAVAATVIHRRGRSSSSSDYVPPTELTPASSLRAVCAVTQYPSSCLSSISSLHNSNTTDPELLFKLSLRVAVDELSNLSKLPSKLKANVKDPRVQKAIEVCGIVFDDAVDRLNESISSLDGGGNGGKILSPSKIGDVETWLSAAITYQETCLDALEELNSTAASEILEDLKTAMKNSTEFASNSLAIVTKILGLLSNFNFPIHRRLLGFGGSDSGFPDWLGPAERRLLENTNATAPHAVVAKDNSGRYKTIKEALAAVKKKSVTRFVIHVKEGVYKENIDLDKNTWNVMIYGDGKTKTIISGNLNFIDGTPTFSTATFAVKGKGFIAKDIGFINTAGAAKHQAVAFRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRECDITGTIDFIFGNSAVVFQNCNIKPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSSISALDNLNAPTYLGRPWKEYSTTVIMQSDIGSFLDPAGWKEWVSGVEPARTIFYAEYKNSGAGSGVDNRIKWAGYKSRLSDDEAAKFTVQSFIQGSDWLPDAAVEFESTL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci762g0005 587 ProSitePatterns Pectinesterase signature 2. 424 433 IPR033131 -
Prci762g0005 587 Gene3D - 274 587 IPR012334 -
Prci762g0005 587 Gene3D Invertase/pectin methylesterase inhibitor family protein 73 235 IPR035513 -
Prci762g0005 587 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 235 IPR035513 -
Prci762g0005 587 CDD PMEI-like_3 77 234 - -
Prci762g0005 587 NCBIfam pectinesterase inhibitor domain 66 234 IPR006501 GO:0004857
Prci762g0005 587 FunFam Pectinesterase 71 235 - -
Prci762g0005 587 Pfam Pectinesterase 281 572 IPR000070 GO:0030599|GO:0042545
Prci762g0005 587 Pfam Plant invertase/pectin methylesterase inhibitor 74 230 IPR006501 GO:0004857
Prci762g0005 587 FunFam Pectinesterase 274 587 - -
Prci762g0005 587 ProSitePatterns Pectinesterase signature 1. 305 324 IPR018040 -
Prci762g0005 587 PANTHER PECTINESTERASE 36 577 - -
Prci762g0005 587 SUPERFAMILY Pectin lyase-like 276 583 IPR011050 -
Prci762g0005 587 SMART PMEI_2 70 230 IPR006501 GO:0004857
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci762g0005 1 581 Carbohydrate Esterase AT1G53840 59.184 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci762g0005 - - qsa:O6P43_027479 854.744