Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci750g0002 ATGTCAAACAGCTCACAAGTCATAACATGCAAAGGTGCAATATGCTGGGGATTAGGGGAAGACGTGAAGGTGGAAGAGATACAAGTAGATCCACCTAAAGCTTCTGAAGCTCGAGTTAAGGTTCTTTGTGCTAGTGTTTGCCACACAGACATCTTGAGAGCTCGAGGTTTTCCTTGTCTCAGTTATGTACTAATCCAAATTGATGTGCAGCCTTCTTTTCCTCTAGCACTTGGGCACGAAGGAGTAGGTGTTGTGGAGAGCATAGGGGAGAAAGTGACGAACCTGAAAGTAGGAGATTTAGTGATTCCAACATACATTGGAGAGTGTCAAGAATGTGAGACCTGTATCTCAGAGGAATCAAACATGTGCATGAGATATCCTTTCACAGTGAGTGGGCTAATGCCTGATGACACATCAAGGATTTCCATTAGAGGGCAGAAGGTGTACCATACGAGTAGCTGCTCAACATGGTGTGAGTACATGGTTAGTGATGCAAACTACCTTGTGAAAGTTGATCCAAGTATTGATTTGGCTCATGCTACCTTCATCTCTTGTGGATTTTCTACTGGTTTTGGGGCTGCTTGGAAGACAGCCCAAATTCAAAGTGGATCAACCATGGCCATTTTTGGCTTGGGAGCCGTTGGATTAGGGGCTATATGTGGTGCCAAGATGATGGGAGCAACTAAGATAATTGGGATTGACATAAATGAGAAGAAGAAAGAAAAAGGAGAAGCTTTTGGGATGACAGACTTCATAAATCCTAATGATCATTCTGATAAGCCTTCTTCTCAATTGGTGAAGGACCTCACTTGTGGACTTGGTGTGGATTATGCCATTGAGTGCATTGGTTTTGCCCCTGTGGTTACTCAAGCCCTAGAATCCACCAAAGTGGGGAGAGGACAAGCAATAGCAATTGGTGCAGGAATAGAAGAATGTGTGCAAGTCAACCGGTTGGGTCTTCTTCTTGGAAGAACTTTAAAGGGTTCCATTTTTGGAGGCTTAAAACCAAAATCTCACCTTCCTATTTTAGCTACCAAATGCCAAAATAAGGATTTCCCTATCGATGAACTTGGGACCCATGAAGTCCCATTAACAGAGATAAGCAAAGCCTTTGAGCTCTTGAAACAGCCAGATTGTGTCAAAGTTCTCATCAAAATGTGTGACGTTTAA 1170 0.4308 MSNSSQVITCKGAICWGLGEDVKVEEIQVDPPKASEARVKVLCASVCHTDILRARGFPCLSYVLIQIDVQPSFPLALGHEGVGVVESIGEKVTNLKVGDLVIPTYIGECQECETCISEESNMCMRYPFTVSGLMPDDTSRISIRGQKVYHTSSCSTWCEYMVSDANYLVKVDPSIDLAHATFISCGFSTGFGAAWKTAQIQSGSTMAIFGLGAVGLGAICGAKMMGATKIIGIDINEKKKEKGEAFGMTDFINPNDHSDKPSSQLVKDLTCGLGVDYAIECIGFAPVVTQALESTKVGRGQAIAIGAGIEECVQVNRLGLLLGRTLKGSIFGGLKPKSHLPILATKCQNKDFPIDELGTHEVPLTEISKAFELLKQPDCVKVLIKMCDV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci750g0002 389 Gene3D - 14 381 - -
Prci750g0002 389 SMART PKS_ER_names_mod 17 384 IPR020843 GO:0016491
Prci750g0002 389 FunFam S-(hydroxymethyl)glutathione dehydrogenase 190 329 - -
Prci750g0002 389 PANTHER ALCOHOL DEHYDROGENASE 6 378 - -
Prci750g0002 389 Pfam Zinc-binding dehydrogenase 213 333 IPR013149 -
Prci750g0002 389 SUPERFAMILY GroES-like 5 200 IPR011032 -
Prci750g0002 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 175 348 IPR036291 -
Prci750g0002 389 Pfam Alcohol dehydrogenase GroES-like domain 35 171 IPR013154 -
Prci750g0002 389 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Prci750g0002 389 FunFam alcohol dehydrogenase 1-like isoform X1 18 189 - -
Prci750g0002 389 Gene3D - 190 329 - -
Prci750g0002 389 CDD liver_alcohol_DH_like 8 385 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci750g0002 46 378 Monolignol Biosynthesis Gene Families AT1G72680 25.075 3.01e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci750g0002 K00121 - gmx:100798341 521.931