Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci743g0008 ATGGACATGACCAGATCCAGTTATGCAGTTATTTATGTGATTCTTCTTTGTGCGTTGGCTAAAGGCGGCTCCGAAGGTAAGAGGTGGAATCTGCACGAGATTCTCAAAGAAGAATGTCGTCTGTCGTCGTCACTTCTTGAAGACAGAAACAAGTTGGAGCAAGCTTGGAAACATTGTAGGAAAGAATTGGCAGAGAGGCACCACGGGAATCAAGATTCTGATGACTCGCGTCCAGCCGCGGAAGCAGAACTTGAAAATATTCTACACAAAGCAACAGAGTTTCTGCCTCCCCAGTCCCAACAAAACTTTCTGGATTGCATCAGAACCAAAACTTCCAATATTGCGCCCGTCTCTCTAGACAATGCTGCCTCTCCGCCTTTGTTTACCAAGTACTGGAATAGTGGCTGTGAAAGGCATTTGCTTGCCCATTCACCAGACGACCAAATCCCGCCAAGCACTACCCCTCCTCATTCTTCTTCTCCATCTTCATCCCCATCTCCGTCCCCATCCCCGTCCCCGTCCCCGGCTCCTGGACTCGCAGGGGAATCACCGAATCATGATACAAACCCTCCTGATTCTTCATCTGATGATTCCCCTTCGGGTTCTCTTTCACCGTTGCCGCCGCCACCTCCGAAATTTCCTAAACTTCCCCCACCCAAACCTTTAGCCTCTCCTCCTCCTCCTCCTCCTAAACGTGACGACAACAATCAGCCGCTAAAAATAATTTTCATTGCTGCAATAACAGTTTGTGTAATCGCAGCATTATTCTTAATCTGCCTCTGCTGGGGCGCCAGCAGCAACAATAACGTCGGCCCAAAAGAGGCACTAAAAGGCGACCGGCCTATAGTCACATTAGCCTCATCTGATGTTTTCGCGGGTAACTTTATGTTTGGTTTTCAACGTTATCCCATTGAATCCCTTTTACATGGATCTTCTAATCTTTTTATCATTATTTTTTCATTTCTTGTTTCAGGTTCACAGAAGTTTGCTGTTCTGGAAAAGTCTGACAAGAAAGAATCCACTACCAACGACAATGTGATCGCAAACTCTGGAGGTTGCTCAGTGACTGAGACAGCATCGTCTACGAGACAAATGGTGGCAGAGCCTCCTCTAAAACCTCCTCCGGGAAAACCATCAGCTCCTCCACCCCCTCAGCCGCCGCCAGCTGCTCCTCGTGCCCCGCCACCTCCACCTCCAAAAGCTAAGGTTCCACCTGTTCCTCGGAAACCAATTCAAGGCAAAAAAAGTGTTGAACAGGGCAACTCTAGCGAGGGAGGTGCATTAGGTGCTCCGAAACCCAAATTGAAGCCATTTTTTTGGGATAAAGTTAATAAAGCTGATCAAGGAATGGTCTGGCAACAGATCAATCAAGGGTCATTCCAGTTCAATGAGGAAATGATGGAGTCTTTATTTGGTTGCGGCCACCAGAAAAAAAATGAACGCAAGAAAGATGCATCCCTTGAACCTGCAATTCAATACGTTCAGATTATTGACCCTAGAAAAGCACAGAATCTATCAATTCTCTTGCGAGCGTTGAATGTGACAACCGAAGAGGTCATTGATGCCCTCAAAGAAGGAAGCGAGATTCCGGTTGAGATCATCCACTCATTACTAAGGATGACACTAACAACAGATGAGGAATTAAAGCTTAGATTATTCACTGGTGATCTTAATCAACTTGGCCCTGCTGAGAGATTTCTCAAGGTTATGGTTGACATTCCATTTGCCTTCAAACGTCTTGAATCTTTGATGTTCATGATTACCTTTACAGAAGATGTCGCGAATCTCAAGGAGTCCTTCGCAACACTAGAGGTTGCTTGCAACAACCTTAGAAAAAGCAGGTTATTCTTGAAACTATTAGAAGCAGTTCTGAAAACCGGCAACCGGATGAATGATGGTACCTATCGTGGTGGTGCTCAGGCATTTAAGCTAGACACACTATTAAAACTGTCCGATGTAAAAGGAACTGATGGCAAAACAACTCTATTACACTTTGTGGTTCAGGAGATTATACGATCTGAGGGTATAAGAGCCGTACGAACACAGAAAGCTAACCAAACTAGCGGGTCTAGTGTGAAAACTGAGGATTTCCTTGATGACACTGATGAAGAATCGACAGTAGAGCATTATCGTGGACTTGGCCTTCGAGTGGTTTCAAGTTTAGGTGAGGAGCTAGAAGATGTCAAAAAGGCAGCAGTTGTAGATGGTGAAGGTCTAACAGCCACAACTTCAAAACTTGGCCAGTCATTATTGAAGTCCAAAGAATTCCTCAGCAATGAGTTGAAGAATCTTGATGAAGATTCGGAATTCCATCGTTCTCTGCAAAGTTTTGTGGATAAAGCAGAGGCAGATATCACATGGCTGTTGGACGAAGAGAAGAGGATAATGGCTTTGGTAAAGAGCACAGCCGATTATTTCCACGGTACTGCAGGAAGGGACGAAGGGTTGCGCTTGTTTGTGGTGGTACGTGATTTCTTGATAATGTTGGATAAGGCATGTAAAGAGGTTCAAGATACAACCACGAAATCAGCAAAGGCTTCAAAGAGAGAGAGTCCAACGACTGTGTCATCTATTGTAGGGACTCAGCAACTACAGGATATTCATCAGAGACTATTTCCAACAATTGCAGAGCGGCGCATGGGTTTCTCTGATTCTGATGATGAGAGCTTGTCACCATAG 2679 0.4517 MDMTRSSYAVIYVILLCALAKGGSEGKRWNLHEILKEECRLSSSLLEDRNKLEQAWKHCRKELAERHHGNQDSDDSRPAAEAELENILHKATEFLPPQSQQNFLDCIRTKTSNIAPVSLDNAASPPLFTKYWNSGCERHLLAHSPDDQIPPSTTPPHSSSPSSSPSPSPSPSPSPAPGLAGESPNHDTNPPDSSSDDSPSGSLSPLPPPPPKFPKLPPPKPLASPPPPPPKRDDNNQPLKIIFIAAITVCVIAALFLICLCWGASSNNNVGPKEALKGDRPIVTLASSDVFAGNFMFGFQRYPIESLLHGSSNLFIIIFSFLVSGSQKFAVLEKSDKKESTTNDNVIANSGGCSVTETASSTRQMVAEPPLKPPPGKPSAPPPPQPPPAAPRAPPPPPPKAKVPPVPRKPIQGKKSVEQGNSSEGGALGAPKPKLKPFFWDKVNKADQGMVWQQINQGSFQFNEEMMESLFGCGHQKKNERKKDASLEPAIQYVQIIDPRKAQNLSILLRALNVTTEEVIDALKEGSEIPVEIIHSLLRMTLTTDEELKLRLFTGDLNQLGPAERFLKVMVDIPFAFKRLESLMFMITFTEDVANLKESFATLEVACNNLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRTQKANQTSGSSVKTEDFLDDTDEESTVEHYRGLGLRVVSSLGEELEDVKKAAVVDGEGLTATTSKLGQSLLKSKEFLSNELKNLDEDSEFHRSLQSFVDKAEADITWLLDEEKRIMALVKSTADYFHGTAGRDEGLRLFVVVRDFLIMLDKACKEVQDTTTKSAKASKRESPTTVSSIVGTQQLQDIHQRLFPTIAERRMGFSDSDDESLSP 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci743g0008 892 MobiDBLite consensus disorder prediction 839 859 - -
Prci743g0008 892 Gene3D Formin, FH2 domain 437 855 IPR042201 -
Prci743g0008 892 SMART it6_source 425 844 IPR015425 -
Prci743g0008 892 MobiDBLite consensus disorder prediction 342 365 - -
Prci743g0008 892 PANTHER FORMIN-RELATED 241 878 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Prci743g0008 892 SUPERFAMILY Formin homology 2 domain (FH2 domain) 438 848 - -
Prci743g0008 892 MobiDBLite consensus disorder prediction 368 406 - -
Prci743g0008 892 ProSiteProfiles Formin homology-2 (FH2) domain profile. 425 855 IPR015425 -
Prci743g0008 892 MobiDBLite consensus disorder prediction 202 234 - -
Prci743g0008 892 MobiDBLite consensus disorder prediction 141 234 - -
Prci743g0008 892 MobiDBLite consensus disorder prediction 149 178 - -
Prci743g0008 892 MobiDBLite consensus disorder prediction 186 201 - -
Prci743g0008 892 Pfam Formin Homology 2 Domain 430 829 IPR015425 -
Prci743g0008 892 MobiDBLite consensus disorder prediction 334 434 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci743g0008 223 880 FH2 protein (formin) Gene Family AT5G54650 46.832 9.87e-175 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci743g0008 - - pcin:129298235 1531.15