Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci740g0003 ATGAAGAGAGCCAGAGAGCAGCAACACCCTCCTCACGCCTTGGATCTCGCTATTTCCCTCTCCCTTCTCCCTCCCCCAATCACGCCCCACAGCATGGAATTTGAATGCAAGACCTGCAACCGCAAGTTCTCTTCCTTTCAAGCTCTTGGAGGTCACAGAGCCAGCCACAAGAAGCCCAGGCTTGATTCCCAAGCCCAGCCCCACAAACCCGATCCCGCGAGATCGGTGCACGAGTGCTCTATTTGTGGCCAGCGATTCTCTCTGGGACAGGCCCTCGGAGGCCACATGCGAAAGCACAGAGCCGCCGTCACAGAGGAGGCCGTCCCCTGCTTGCCGGTTCTCAGGAGGTGCAACAGCAAGAGGGTGGTGTGCCTCGACTTGAACTTGACCCCTCTCCAGAATGACCTCAACCTCCTCTTCGGAGACAGGGCTCCTCAGCTCAATCTCTCCCTGTGCTCATGA 462 0.5801 MKRAREQQHPPHALDLAISLSLLPPPITPHSMEFECKTCNRKFSSFQALGGHRASHKKPRLDSQAQPHKPDPARSVHECSICGQRFSLGQALGGHMRKHRAAVTEEAVPCLPVLRRCNSKRVVCLDLNLTPLQNDLNLLFGDRAPQLNLSLCS 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci740g0003 153 Gene3D Classic Zinc Finger 31 99 - -
Prci740g0003 153 PANTHER ZINC FINGER PROTEIN ZAT5 32 134 - -
Prci740g0003 153 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Prci740g0003 153 SMART c2h2final6 34 56 IPR013087 -
Prci740g0003 153 SMART c2h2final6 77 99 IPR013087 -
Prci740g0003 153 MobiDBLite consensus disorder prediction 50 74 - -
Prci740g0003 153 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Prci740g0003 153 MobiDBLite consensus disorder prediction 55 74 - -
Prci740g0003 153 Pfam C2H2-type zinc finger 34 59 - -
Prci740g0003 153 Pfam C2H2-type zinc finger 76 101 - -
Prci740g0003 153 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Prci740g0003 153 SUPERFAMILY beta-beta-alpha zinc fingers 34 99 IPR036236 -
Prci740g0003 153 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci740g0003 31 151 C2H2 Transcription Factor Family AT2G37430 52.632 1.15e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci740g0003 zf-C2H2_6 2.2e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci740g0003 - - pcin:129302030 257.684