Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci740g0002 ATGAAGAGGGAGAGAGATTGCGAGAGAATGGACGTGGCCAATTGTCTGATGCTGTTGTCTCACCATGCTCGTCAAGAAACAAAAGCTGAGGGTTTAGAATTCGAATGCAAGACGTGCAAGCGAAAGTTCTCGTCGTTTCAGGCGCTGGGAGGGCACAGGGCTAGCCACAAGAGGGCTAAGTTGGAGGGTGGCGAACAAGACCTGAAAGCAGAGGCCAAATCTCTGAGGTTAGGGAACAAACCCAGGATGCACGAGTGCTCCGTCTGTGGCATGGAATTCTCGCTGGGCCAAGCACTCGGAGGCCACATGAGGAAGCACAGGGCTGCTCTTCACCATGATACGCACCCAGTGGACGACGTCGTTGCCAGGGTCCCTGTTCTTAAGCGATCCAATAGCACCAGGGTTCTGTGTTTGGATCTTAACTTGACGCCTCTCCAGAATGACTTGAATTTATTGCTCGCAAACATGGCACCCGCCTTCACCTGA 486 0.5288 MKRERDCERMDVANCLMLLSHHARQETKAEGLEFECKTCKRKFSSFQALGGHRASHKRAKLEGGEQDLKAEAKSLRLGNKPRMHECSVCGMEFSLGQALGGHMRKHRAALHHDTHPVDDVVARVPVLKRSNSTRVLCLDLNLTPLQNDLNLLLANMAPAFT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci740g0002 161 Pfam C2H2-type zinc finger 84 108 - -
Prci740g0002 161 Pfam C2H2-type zinc finger 34 58 - -
Prci740g0002 161 SUPERFAMILY beta-beta-alpha zinc fingers 34 106 IPR036236 -
Prci740g0002 161 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Prci740g0002 161 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Prci740g0002 161 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
Prci740g0002 161 SMART c2h2final6 34 56 IPR013087 -
Prci740g0002 161 SMART c2h2final6 84 106 IPR013087 -
Prci740g0002 161 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 116 IPR013087 -
Prci740g0002 161 PANTHER ZINC FINGER PROTEIN ZAT5 4 146 - -
Prci740g0002 161 Gene3D Classic Zinc Finger 31 106 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci740g0002 1 154 C2H2 Transcription Factor Family AT2G37430 44.643 2.85e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci740g0002 zf-C2H2_6 1.8e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci740g0002 - - pcin:129302030 303.523