Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci732g0003 ATGAGCAAAACTAACCAAGTCTCCGCCGGAACACTGGATTCCGGCAACCACATTCCCGTGTCAAAGAAGAACAAGAAGCTCTTCTTCTTCGCTTCCCTCACTACTCTGCTCCTTGTCTCCGCCATTGTCGGCGTTTCCGTCGGAGTTAACTCCCGAAAAAACTCCGGCGATGGCCCCCACAATGTCCATTCGAGAATGGCACACGCAATCGTCAAAAGCGCTTGCAGTTCCACCATGTACCCCGATCTCTGCTTCTCCGCCATCGTCACTGAACCCGGCTTCGCTCGGAAAGTCTCCACCCGCAAAGACGTCATAGAACTATCCCTCAACATTACCATCAGAGCCGCACAACACAACTACTTCAACGTCAGGAAGCTCCAAACCAGAAAAGGCCTCACAAAGAGAGAGAAAATCGCTCTTCACGATTGCTTAGAAACGATTGACAACACCCTGGACGAGCTTCACCGAGCCATCGCCGACCTCGAAGACTCCGGTCATCACGCCGACAACCTCAAGACTCTCATCAGCGCCGCCATAACCAACCAAGAGACCTGCCTGGACGGGTTTTCCCACGACGGCGCTGATAAACACGTGAGAGAAGGGCTGATGGACAGGCAACTTCACGTGGAACGCATGTGCAGCAACGCACTGGCGATGATCAAGAACATGACGGACAGTGAAGTGTCGATGAGAAATAGAAAATTGACGGAGGTGGATGAGGCGGCGGACGGGGTAAGGTGGCCGGAGTGGATATCGGCGGGAGACAGGAGGCTTCTGCAGGCGCCGACGGTGACTCCAAATGTGGTGGTGGCAGCGGACGGGAGTGGGAATTACAGGACCGTGGCGGAGGCGGTGGCGGCGGCGCCAGAGGGGAGCAGCACGAGGTATGTGATAAGAATAAAAGCAGGAGTGTACAGAGAGAACGTGGAAGTGACGAAGAAGAAGACGAATATAATGTTTGTGGGAGACGGAAGAACCAACACTGTCATCACAGGAAACAGAAACGTCGTTGATGGAAGCACAACCTTTCACTCCGCCACTGTAGCTGTAGTAGGAGGACGATTCTTGGCTCGAGACATAACCTTTCAAAACACGGCCGGTCCGTCCAAGCACCAGGCGGTGGCTCTCCGGGTGGGCGCTGACCTCTCCGCCTTCTACCGGTGCGACGTGCTCGCATATCAGGACTCCCTCTACGTCCACAGCAACCGCCAGTTCTTCATAAACTGTCTAATAGCAGGCACCGTCGACTTCATCTTCGGCGACTCTGCCGTCGTCTTACAAGACTGCGACATCCATGCCCGCCGTCCCAACTCCGGCCAGAAGAACATGGTCACCGCACAAGGCCGTGTCGACCCTAATCAGAACACCGGCATCGTCATCCATAACTGCAGAATCGGCGCCACCCAGGATTTATTGGCAGTGAAGGGAAGCGTGGAAACGTACCTGGGGAGGCCATGGAAGGAGTATTCAAGGACAGTGATAATGAAGAGTGAGATAAGCGACGTGATCCAGCCAGAAGGATGGTTCCCTTGGGAAGGGAATTTTGCTTTGAACACTTTGTTCTACGGGGAGTATCAGAACACTGGACCTGGAGCTGTTACTTCTGCAAGAGTTAACTGGAAAGGATTTAGGGTTATTACCAGTGCCACTGAAGCTCAAAGTTTCACTCCTGGAAACTTCATTGCAGGCTCTAGCTGGTTGCGTTCTACAGGCTTCCCATTTGCCCTTGGCCTGTAA 1737 0.5366 MSKTNQVSAGTLDSGNHIPVSKKNKKLFFFASLTTLLLVSAIVGVSVGVNSRKNSGDGPHNVHSRMAHAIVKSACSSTMYPDLCFSAIVTEPGFARKVSTRKDVIELSLNITIRAAQHNYFNVRKLQTRKGLTKREKIALHDCLETIDNTLDELHRAIADLEDSGHHADNLKTLISAAITNQETCLDGFSHDGADKHVREGLMDRQLHVERMCSNALAMIKNMTDSEVSMRNRKLTEVDEAADGVRWPEWISAGDRRLLQAPTVTPNVVVAADGSGNYRTVAEAVAAAPEGSSTRYVIRIKAGVYRENVEVTKKKTNIMFVGDGRTNTVITGNRNVVDGSTTFHSATVAVVGGRFLARDITFQNTAGPSKHQAVALRVGADLSAFYRCDVLAYQDSLYVHSNRQFFINCLIAGTVDFIFGDSAVVLQDCDIHARRPNSGQKNMVTAQGRVDPNQNTGIVIHNCRIGATQDLLAVKGSVETYLGRPWKEYSRTVIMKSEISDVIQPEGWFPWEGNFALNTLFYGEYQNTGPGAVTSARVNWKGFRVITSATEAQSFTPGNFIAGSSWLRSTGFPFALGL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci732g0003 578 CDD PMEI-like_3 73 224 - -
Prci732g0003 578 NCBIfam pectinesterase inhibitor domain 64 223 IPR006501 GO:0004857
Prci732g0003 578 SUPERFAMILY Pectin lyase-like 263 577 IPR011050 -
Prci732g0003 578 SMART PMEI_2 66 219 IPR006501 GO:0004857
Prci732g0003 578 Pfam Plant invertase/pectin methylesterase inhibitor 70 219 IPR006501 GO:0004857
Prci732g0003 578 Coils Coil 144 164 - -
Prci732g0003 578 FunFam Pectinesterase 67 224 - -
Prci732g0003 578 Pfam Pectinesterase 267 563 IPR000070 GO:0030599|GO:0042545
Prci732g0003 578 ProSitePatterns Pectinesterase signature 1. 292 311 IPR018040 -
Prci732g0003 578 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Prci732g0003 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 224 IPR035513 -
Prci732g0003 578 Gene3D - 261 578 IPR012334 -
Prci732g0003 578 PANTHER PECTINESTERASE 40 568 - -
Prci732g0003 578 FunFam Pectinesterase 261 578 - -
Prci732g0003 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 224 IPR035513 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci732g0003 22 578 Carbohydrate Esterase AT3G14310 66.838 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci732g0003 K01051 - cave:132186541 838.18