Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci727g0001 ATGAGGCAGCACTGTCCCAACTATTTTGATCAAATGAATTGTGATTCACTGCAGCCAATCCACATGGCACTTGAAGGCGCTTGCTCTTCGTCTTCTTTCATCCACGGGTGGACCTACGATGTCTTTGTAAGCTTCAATGGCGGAGACACTCGTTATGGTTTCACCGGCAACCTTTGTTGGGCTCTGAATCAAAAGGGGATACACATCTTCCGAGACGACGACAGCCTCAGGAAAGGCGAAAGCATTTGCCCAGCTCTTCTGAAGGCGATCGAAGAATCTAGAATCGCCATCATAGTATTCTCCGAGAACTATGCATCGTCAAGCTGGTGCCTGGACGAACTGGTGAAGATAATGGAATGTATGAAGGAGAAGGGACAGAAGGTTCGACCGGTGTTTTATAACGTATATCCTTCAGATGTAAGGCAAGCGAGTGGAAGTTTTGGAAGGTCAATGGCTGAGCATGAAGCCAGGCTCAAGCAAACAGTTCGTGATTGGAGCCTTGCACAAAAAACATTGCAAAACTGGAGAGCTGCGCTTCGGGAGGCTGCCAATTTGGCTGGATGGCATTTCACAGACGGCCGGTATGAGTTTGAGTTTGTTCAAAAAATCACGGAAGAGGTTTCTAAAATATTAAGTCGCACAATTTTACACATAGCTGATCATCCCGTGGGATTGGAGTCTCGAATATTAGAAGTGATATCACTTCTAAGTATTAACTCTAAAAAAGAAGCTTTGATGGTGGGAATTCATGGGATTGCTGGAATTGGTAAAACAACGATCGCCAAAGCAGTGTATAACTCGATTGCTAATCAGTTTGATTCCTCTTGTTTTCTTGGTGAGGTGAGAGAAAACTCAAGGAAGAATGGTCTAGCACAACTACAAGAGACAATTTTTTCGAACTTGCTTGGAGAAAATAATATCAAGTGCAGCAACGTAAGTCAAGGAATTCCTATATTAGAAAAGAGATTTCGTTTCAAGAAGATTCTTTTGATTCTTGATGATGTTGATGATTTTAGACAAGTGAAATCTTTAGCTGGAAGAAAAGATTGGTTCGGGCAGGGAAGTAGGATAATTATAACAACAAGAAATGAACATTTCTTAAGACAACATGGGGTTGAAATTCTGCATGAAGTGAAAGGACTGGAAGATGATGAATCACTTGAATTGTTTAGTTGGAATGCCTTCAAAAAAAGTGAACCTGATCCAAGCTATGCGGAGATAGCAAAGCATGTAGTGAAATATGCCCAAGGCTTACCATTGGCTTTGAATGTTATAGGTTCTGATTTGTTTGGCAAAACGATCCAAGAGTGGAAACTTGTTTTGATGAAATATGGTATTGGAATCCTTGAAGAGGAATCTCCAAGAGTTGGGAATGGGTTTTGTACAGGAATTCCCTTGGTTCAGAACTCAAGAGTTTCTAGAGTCCTTAAACTTCTTGCTAACAACAATTTCAGATTGCTAGAGTGGAATGAACATCAGTCGCTATCTTTACCAACTGAGCATTATCCAGAGATACTTCCTGTTCTCAACGCGCCTCATTGCCATATAACTAATTTGGTGGACCTCAGTGACAGTGGTTCTATTACAAGAATACCAGATGTCTCTACAGCACTTCTTACTAGCAAATGTCCAACCTTAGCTGAAATTTTTGATCAATTTATTGGAAATCTGGGCGCACTGCTTATTGAAAATTGCCTCAAACTTGAGCGTTTGCAACCTGCAGGAATGAGTTCTGCATCTCTTGAACCTCTAAATCTTGGAAAACGCTCTAACTTGCCGAGTTTCTCGAATAAGTTGGCAGAAAAGGAAGATATGAAACATGCCGGCACACAAGGGACTTCCATAAAAGTCCTTCACAATTCAATAACAAAGATTGATGGTCTTCAAGAGCTAGTTTTGAAATCTTCTGCTGAGGATCCTCATATCCACACTGACATGTTTCATAATACTGAAGAAGATAATGTGGAAGAATGTTCATCAGGTCCAAAGCTGCTGGGGAAGATAGTAATGATGTATTGGACAAATTGGGCACCGAAGTTAAATAAACTGGTTTTAGAAAATTGTGATTTATCTGATAATGATCTCGAGCTGTTTCTCAGTTCCTTTTTAAAATTGAAGTGGTTGATACTATCAAACAACAACTTTGTAACCATTCATGAGTGCATTAAAGAACTTGCAAACCTTCTTTTTCTTTGTGTGAAAAATTGCAAGCAGCTTAGATACGTTTCTGTGCTTCCACCTTACTTGCAACACATAGATGCAAGGAACTGCATATCATTGACTCAGGATTCATTCGACGTAATATTAAGTCAGGCATTTCAAGAGGTGGAGAACATGGACATTGTAGTGTGGAGGAAGCGAATCCCAAAGTGGTTCGACTATTGTGGCAGAGGAGGATCTGTGGGTTTTTGGGTTCGCCGAGAATTCCCTGGAATTGCGGCACTTTTGGTTCTAGGGGGTCAAACTGAAGTAGAAACCAATTTTACATGTGAATTCACACTGACCATCAATGACATTCAAGTGCTAAAAGGTGAAAGAACGTTGCCGAGGGACCATGTCTGGCTGTTTGACCTGCGAATTCACTTAACAGCCAAAGAGAGGCATTACATCAACAAGCATCTTCACAGAAGTTGGAACCATGTGGGGATTTCATGTACTGCTAAGAACAATCATCCACACAATTCCATTGTTAGATTCAGTGGCATTCATCTCTCTAAGGATAGAATGAACATCCACGACGTCTCCTTCATAAGCCCTGATCTTCGGGGTTCAGATATTGCCCGTCACAAAATGGAAAATAATGATGCCGACATTTATGAAGTAAGTGGTGGACACGCTGCTTTTGATCAAGCATCAGCTGAGCTTGTTGACAAGAAGATTGTAAGTTTGATGGAAGGATCTAGCAGAGCAGATGATGAGGACGAGGAAGAACATTTGACTGGAACTGAGAATGAAGACCCAGAAAGACGTGACGTAGTGGTCAAGGACAGAGGAAAAGGAACAGTAAAATACAGTGACCTCGCTGAGGAAGAACAAAATAAGGATTTTTTTATTGAAAGTGCAACAGGAAAGCTGGAGAAGAGCAAACTTGAGCAGGAGTCAACTTCCTTTGCCTATGCAAGCAAAAACAATGGTACTTCCAACATTAAGAATCCCGAAAAGATTGGCTTCACAAGGACGAAAGGAAACCCAGAAGCAGGGGAATCTCATATGCATATTCCAGAATCTAGAGCTTTTCTACAGTTGGAGTCAAAAGACGCTGGTGATAGTCTGATCTCGATGGAAGCATTTTATGCATCTCTTGAAGCAGAGCTGGCAACTCTGTCTGATCCCGAAGATAGCCAGGTCAACACAGTGTCAGGAGAGGGGACCCAGGAAGCACTGCAAATAGTACGAGGTTTTGTCTCAGAAAAATTCTCTCTTCTGTTACAACCTGAACAATCAAAGCTGATGAAGAACAATCTTGAGTACCTCCTTAGTTTGACCTCAAAAGATGGAATATCCCTGAGGATGAGATCAGTTATAAGTCAAATTTCGAGGAGTTTTACTGAGTGGTTTGTGGATTATAATGATGCAAGTTTCAAACTGGAATCTGCAGCTGTAGAAATGTCCAAAGTTGGAGAACTGAAAGAGGGGGTTGAAGGTAATGTGAGAGAGTTCAGGCAGGTGGAGGAATCAGAGAATGAAATATGGAAGCAGTTGGAATACTTGAAAAGAAGGGAGAGAGAGTTAGAAGCGGAAATCAATGGGGTAAAAGCTAAGATTGCGGATTTTACTTCAGAAAGAGAGAATGTTGCTAAGAGAAAAAGAAAACTCTACGAGAATGGAAGAATGCTTAAAGCTAAGAGGGATGACTTATGGGTCAGACTGCCCCGGTTGATATCAGAAGAGCAATCAGCTAAAATAATCCAAACTAACATAGAGGAAGAGTGGTACAAACTCGGACTACAATTTATTCAAGGCTCAAGTTTTGAATATGGCAACTAG 3987 0.4113 MRQHCPNYFDQMNCDSLQPIHMALEGACSSSSFIHGWTYDVFVSFNGGDTRYGFTGNLCWALNQKGIHIFRDDDSLRKGESICPALLKAIEESRIAIIVFSENYASSSWCLDELVKIMECMKEKGQKVRPVFYNVYPSDVRQASGSFGRSMAEHEARLKQTVRDWSLAQKTLQNWRAALREAANLAGWHFTDGRYEFEFVQKITEEVSKILSRTILHIADHPVGLESRILEVISLLSINSKKEALMVGIHGIAGIGKTTIAKAVYNSIANQFDSSCFLGEVRENSRKNGLAQLQETIFSNLLGENNIKCSNVSQGIPILEKRFRFKKILLILDDVDDFRQVKSLAGRKDWFGQGSRIIITTRNEHFLRQHGVEILHEVKGLEDDESLELFSWNAFKKSEPDPSYAEIAKHVVKYAQGLPLALNVIGSDLFGKTIQEWKLVLMKYGIGILEEESPRVGNGFCTGIPLVQNSRVSRVLKLLANNNFRLLEWNEHQSLSLPTEHYPEILPVLNAPHCHITNLVDLSDSGSITRIPDVSTALLTSKCPTLAEIFDQFIGNLGALLIENCLKLERLQPAGMSSASLEPLNLGKRSNLPSFSNKLAEKEDMKHAGTQGTSIKVLHNSITKIDGLQELVLKSSAEDPHIHTDMFHNTEEDNVEECSSGPKLLGKIVMMYWTNWAPKLNKLVLENCDLSDNDLELFLSSFLKLKWLILSNNNFVTIHECIKELANLLFLCVKNCKQLRYVSVLPPYLQHIDARNCISLTQDSFDVILSQAFQEVENMDIVVWRKRIPKWFDYCGRGGSVGFWVRREFPGIAALLVLGGQTEVETNFTCEFTLTINDIQVLKGERTLPRDHVWLFDLRIHLTAKERHYINKHLHRSWNHVGISCTAKNNHPHNSIVRFSGIHLSKDRMNIHDVSFISPDLRGSDIARHKMENNDADIYEVSGGHAAFDQASAELVDKKIVSLMEGSSRADDEDEEEHLTGTENEDPERRDVVVKDRGKGTVKYSDLAEEEQNKDFFIESATGKLEKSKLEQESTSFAYASKNNGTSNIKNPEKIGFTRTKGNPEAGESHMHIPESRAFLQLESKDAGDSLISMEAFYASLEAELATLSDPEDSQVNTVSGEGTQEALQIVRGFVSEKFSLLLQPEQSKLMKNNLEYLLSLTSKDGISLRMRSVISQISRSFTEWFVDYNDASFKLESAAVEMSKVGELKEGVEGNVREFRQVEESENEIWKQLEYLKRRERELEAEINGVKAKIADFTSERENVAKRKRKLYENGRMLKAKRDDLWVRLPRLISEEQSAKIIQTNIEEEWYKLGLQFIQGSSFEYGN 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci727g0001 1328 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 39 443 IPR044974 GO:0006952
Prci727g0001 1328 ProSiteProfiles TIR domain profile. 37 211 IPR000157 GO:0007165
Prci727g0001 1328 Coils Coil 1234 1261 - -
Prci727g0001 1328 FunFam Disease resistance protein (TIR-NBS-LRR class) 35 213 - -
Prci727g0001 1328 Gene3D Ribonuclease Inhibitor 610 782 IPR032675 -
Prci727g0001 1328 MobiDBLite consensus disorder prediction 966 995 - -
Prci727g0001 1328 Gene3D - 380 452 IPR042197 -
Prci727g0001 1328 SMART till_3 38 185 IPR000157 GO:0007165
Prci727g0001 1328 Gene3D - 209 374 IPR027417 -
Prci727g0001 1328 SUPERFAMILY RNI-like 503 770 - -
Prci727g0001 1328 Gene3D - 35 208 IPR035897 -
Prci727g0001 1328 PRINTS Disease resistance protein signature 322 336 - -
Prci727g0001 1328 PRINTS Disease resistance protein signature 723 739 - -
Prci727g0001 1328 PRINTS Disease resistance protein signature 415 429 - -
Prci727g0001 1328 PRINTS Disease resistance protein signature 246 261 - -
Prci727g0001 1328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 447 IPR027417 -
Prci727g0001 1328 Pfam NB-ARC domain 229 442 IPR002182 GO:0043531
Prci727g0001 1328 SUPERFAMILY Toll/Interleukin receptor TIR domain 29 188 IPR035897 -
Prci727g0001 1328 Pfam TIR domain 39 210 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci727g0001 39 451 WRKY Transcription Factor Family AT4G12020 27.619 3.37e-35 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci727g0001 - - pcin:129298171 2635.52