Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci718g0001 ATGGGTCTGAGAGACATAGGGGCTTCACTCCCTCCTGGGTTTCGTTTCTATCCGAGCGACGAGGAGTTGGTTTGTCATTACCTGTACAAGAAGATCACCAATGAGGAAATTCTCAAGGGTACTTTGGTCGAAATCGACTTGCATACATGCGAGCCATGGCAGCTTCCAGAGGTGGCAAAGCTGAACACGAACGAATGGTACTTCTTCAGCTTCCGTGACCGTAAATACGCCACGGGATTCCGGACAAATAGGGCGACGACGTCTGGGTATTGGAAGGCGACAGGGAAGGATAGGACCGTGCTGGACCCAATGACACGCGAGGTTGTAGGGATGAGGAAGACGCTGGTGTTCTACAGGAACAGAGCCCCCAATGGCATGAAGACTGGTTGGATCATGCATGAATTCCGCTTGGAGACCCCACACATGCCCCCCAAGGAGGACTGGGTTTTGTGTAGAGTATTTTACAAAAGCAGAGCAGACAACACTGCCAAATTCAGCCCGCAAGACATGTTTGAGACTGCCCCTTCCTTTACTTTGCCTTCATCTCCGACCAATCAAACTGTGCCTCCTGGCTTCACCACTTTCACCTCCATTCCACCCCATGATTACCAATACCAGAACCAGAACAGCTCTCTCATGAATCTCCTTCAGTTTTCTCGGGGAACAAACATTAGTACTGTCTCTCACAGTATTCCAAAAGGAGATCATGTTGGATATGACGATGGATTCTTATGGGACATGGATCTGGAAGAAAACAGCATCCACCACAATGACGTGGCCTCAAACTTGGACGGAATGAGATTCGATGTTGATAATGACAGTATGGTTTTGTTATAA 837 0.4851 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEILKGTLVEIDLHTCEPWQLPEVAKLNTNEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPMTREVVGMRKTLVFYRNRAPNGMKTGWIMHEFRLETPHMPPKEDWVLCRVFYKSRADNTAKFSPQDMFETAPSFTLPSSPTNQTVPPGFTTFTSIPPHDYQYQNQNSSLMNLLQFSRGTNISTVSHSIPKGDHVGYDDGFLWDMDLEENSIHHNDVASNLDGMRFDVDNDSMVLL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci718g0001 278 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 206 - -
Prci718g0001 278 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Prci718g0001 278 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Prci718g0001 278 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Prci718g0001 278 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci718g0001 6 180 NAC Transcription Factor Family AT1G56010 53.005 1.56e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci718g0001 NAM 8.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci718g0001 - - pcin:129298149 589.726