Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci711g0002 ATGGGGAGGAGACCTGCAAGGTGTTATCGGCAAATAAAAAACAAACCATACCCTAAATCACGCTATTGCCGTGGTGTTCCTGATCCCAAGATCAGAATTTATGATGTTGGAATGAAGAAGAAAGGTGTTGATGAGTTTCCTTTCTGCGTCCATCTTGTTAGCTGGGAGAAGGAAAATGTTTCAAGTGAAGCGCTGGAAGCTGCTAGGATTGCTTGCAACAAATACATGGCCAAATTTGCTGGAAAGGATGCATTCCATTTGAGAGTCAGGGTTCATCCATTCCATGTTCTTAGGATCAACAAAATGCTTTCATGTGCTGGAGCTGATAGGCTTCAAACAGGGATGAGAGGTGCATTTGGAAAGCCACAGGGTACATGTGCTAGAGTTGCCATTGGTCAGGTCCTTCTTTCTGTCCGCTGCAAGGACAGCAACAGTCATCATGCACAGGAAGCCCTCCGTCGTGCCAAGTTCAAGTTCCCTGGTCGCCAAAAGATCATAGTTAGCAGGAAATGGGGTTTCACCAAGTTTAACCGAACAGACTATGTGAAGTACAAGTCAGAGAACAGGATTGTGCCAGATGGTGTAAATGCAAAGCTTCTTGGATGCCATGGACCGTTGGCTAACCGTCAATCTGGAAGAGCTTTCCTGTCCTGCTGCAACTGCTTAGGTAGTCTGTTACAAGAAATAGTAATCTGGACCACAGTAGATTTTGACAAATTGAATGATTTTTTCTTTCTTTCTTTTTTTTATGTGGAAAAATTTGTGTTTATTTATGTTGCGTATTGTACTATACTGAGTTCAATTGTGTTTGCGTGGGCGTCTACAATATAA 831 0.4284 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYVKYKSENRIVPDGVNAKLLGCHGPLANRQSGRAFLSCCNCLGSLLQEIVIWTTVDFDKLNDFFFLSFFYVEKFVFIYVAYCTILSSIVFAWASTI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci711g0002 276 CDD Ribosomal_L16_L10e 41 166 IPR016180 GO:0003735|GO:0005840|GO:0006412
Prci711g0002 276 Pfam Ribosomal protein L16p/L10e 12 166 IPR016180 GO:0003735|GO:0005840|GO:0006412
Prci711g0002 276 Gene3D Ribosomal protein L10e/L16 1 217 IPR036920 GO:0003735|GO:0005840|GO:0006412
Prci711g0002 276 PANTHER 60S RIBOSOMAL PROTEIN L10 1 212 IPR001197 GO:0003735|GO:0005840|GO:0006412
Prci711g0002 276 FunFam 60S ribosomal protein L10 1 206 - -
Prci711g0002 276 NCBIfam 50S ribosomal protein L16 1 174 IPR001197 GO:0003735|GO:0005840|GO:0006412
Prci711g0002 276 ProSitePatterns Ribosomal protein L10e signature. 108 129 IPR018255 GO:0003735|GO:0005840|GO:0006412
Prci711g0002 276 SUPERFAMILY Ribosomal protein L16p/L10e 4 173 IPR036920 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci711g0002 1 220 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 87.273 6.33e-144 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci711g0002 K02866 - pvy:116105818 443.736