Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2969 ATGGCTGCTGAGGTTGTGGGTGGAGCATTTCTCTCTGCTTTTCTTCAGGTCGTTTTTGATAGGCTGGGTACTACTTCTAGCACAAACAACTGCTTCGGGTCAAGAAAGCTCGTGGATCAATTGCTCCACGACCTCAAGATCAACCTCATCTCTGTGAATGAAGTGCTTGATGATGCAGAAGCAAGGGAATACACAAGCTCTAATGTCAAGGAGTGGCTTCAGGAGCTCAAACATACTGTTTATGTGGCTGATGACCTCTTAGATGAGATTGCTACAAAGGCGATCAGGTTAAAGATCGAAGCTAAGACTCAACCTGCTACCAGTAAGGTACGACGCTTCTGTACTTGTTTTGTTAATTCATTTGACAAACGCATGGAAGCTAGAATCCAGGAAGTGCTTCACGACCTGGATTTGCTTAAAGAACAAAAGGATGCTCTGGGATTGAAGAAAATCTCTGGTGGTCGTAGCGAGATTGGAGTTGGTGGGAAAGTATCCTCTAGATTGCCAACTACATCTCTGGTGGCTGATGAGTCCCGCATATATGGTAGAGATGGTGATAAAGAAGAAATAATTCGTCTTTTACTTAATGAAGATCTGAGCAGGGGCCCACTGTCTGTGATCTCTGTAGTGGGTATGGGTGGTTCGGGGAAAACCACTCTTGCTCAACTGGTGTACAATGATCGGAGGATGAAGGATCAATTTCAGCTCAAAGCTTGGGTGTGTGTTTCCGAAGAATTTGATGTTTTCCGAATTACAAAAACAATACTTTCTGCACTTGACTGTCCAATAACAGAACATGAAGATCTAAATCAGCTTCAATTGAAACTGCAAGAGAAATTGACGGGGAAGAAATTGTTGCTGGTTCTCGACGATGTCTGGAATGACCAGAAATCCGATTTGGAATCATTACAAGTTCCTTTTCGTTCTGGGGCTTCTGGAAGTAAGATCCTTGTTACAACACGTGATAAAAAGGTAGCATCAGCCATGGTCTCTGTTGAAGTGCATCGCATAGCTTTACTGAATGAAGAAGATGGTTGGAAGTTATTTGAGGAACATGCGTTCAAAAACAACGATGCTAGCTTGTGTTCAAGTCTACAGGCAATTGGCAAAAAAATTATTGAAAAGTGCGACGGGTTGCCTCTGGCCATAAAATCATTGGGTAGCCTCTTGCAAACAAAATTTTCAGAGAACTATTGGAATGAAATTCTTGAGAGTGAGATATGGCAGTTACCAAAGAGTAATATAATGCCAGCTCTACGGCTAAGTTATCATTATCTTCCTTCTCATTTGAAGAGGTGTTTTGCGTTCTGTTCTATATTTCCTAAAGACTTTGAAATTGACAAGGAGTCTCTAATCCAAATGTGGATGGCAGAGGATTTGATACGTTGCAACCAAGGAAATAAAAGTGTGGAGGAATTGGGGAATGAAATTTTGGAAGAACTAGAATCAAGGTCATTTGTTGAGAAATCAAGATTTGATGATGACAAATTAATCATGCACGACCTGATAAATGATTTAGCGAAATCAGTCTCCGAAGGATTTTGTTTGATGATGGAGGGTGATAAGGTGCAAAATAATATTAATGAAAGGATACGCTACTGTTCATTCTCAACTTTTGTCAGAAAGGATGAATTATCATTGGAACCTATTTATGAGTGTGAGCAGTTACGATGTTTTGCTACTCTACCACGAGAAATGTACGGTCCTATTGGTGGTAAGGTTGAGGTTGAAATGTTTTCAAGATTTAAGCACCTGCGAGTTTTGAGCTTGAATTTGGTTTCAACTATCACTAAATTAAGTGATGGTATAAGGAATTTAAAGCACCTTCGTTATTTAGACCTCTCTCGTAGTAGGATTAAAAAGTTACCCGATTCAATCGGCACCGTGTATAATTTGCAAACTTTGAAATTGATCTGCTGCCGTGAAATTGTTGAGTTACCCGAGGATTTGTACAAATTAATGAATTTGCATTATTTAGACCTTTCAGGTACTGGGATCAGCAAGTTACCTGATTCAATTTGTAAGGTGCTCAGTTTGCAATCGTTGAAATTGGGAGGGTGTAGGTCTTTGGCTGAATTGCCAGCAGATTTGCACAATCTCATCAATCTTCGACATCTTGATTTGGTTGGGACTAACATAAGGGAGATGTCAATAAACATTGGAAGGATGGAACATCTTCAAGTATTGACAAGATTCTGTGTGGGAAAGCAAAGCTGGCCCAATATTAGAGAGTTAGGAAAATTCAATATTAGAGAGTTAGGCAGGCTTGAGATTTTTGAGTTGGATAACATCAACGATCCAATGGATGCCAAGGTGGCCAATATGAAAGAGAAGAATCACTTGAAAAACTTAACTTTGCGATGGAGTGGAAACAATGTGGATTCACAAAATGAAATGTCCGTTTTGGAGGCTCTTCAACCTCATATCAACTTGAACCATCTTGTTATTAAAAACTATGGTGGCACAAGGTTTGCGGACTGGATGGATGCTCCTTATCTACCTAATTTAGTATCTGTTGACTTGAGGGCATGTAAATATTGCTTTTGTTTACCACCACTTGGGCAGCTGCCCTCTCTAAAGATGCTTCGAATTTCTAAATTAGAAGGAATAAAGGAGATTGGGTCAGAGTTTTACGGGGAGAATTTATCAATTGCTCCGTTTCCATCCCTTGAAAATTTGCTAATTAAAGATATGGGGGAATTGGAAGAATGGAAGCATTTTGAAGGTGAATGTTTTCCTCGCCTTGAACTCATGTTTATAGAAAGCTGTCCGAAATTAAGGAAATCCCTTCCTCTACGCCTTCCATGTTTGGGATATCTATTAATTACAGGATGTGAAGGCTTGGAACTTGAATCATTCCCTATTAAACATTCCTCTTATCCGAAACTCGAAAATATCACCCTTTCTGGCATGACCCATCTGAAGTCACTTCTTGAAGACATGCATGCACAGCTCCCCTGTCTTCGTTCTTTAGAGCTGAAGAGATGTCCACAGCTACAATTGGTTCCTCAAAGAGGTTTTCCTTCAAGCCTTGTCAGGATTTCAATAAAAAGTTGTCCGAAACTCATAGCTTGTCGTATGAGCTGGGGCTTGCACAAGCTTCATTCTCTACAAGAGTTATCCGTGGGTGGTCATGATTTTGAAGATGCCGCGTCTTTCTTAGAAGAGCAACATTTGCCGCCCAATCTAACATCTCTTTTTCTCAATGGATGTTCAAATTTGACAAAAATAAACAACAATGGCCTTCTCTCCCTCACATCTCTTCGATCCTTAGAGATTTGGGATTGCCCAAATCTCCATTCTTTTCCAGAGGAAGGTTTACCCGACTCCCTTTCTTCAATACATATTGGAGGAAATAGTCCATTACTAAAGCAGCGGTACCAACAAAAAGTGGATGGACCAGGCTGGCATAAAATTTCTCACATTCCAGAGGTGTATATGGATTAG 3447 0.4027 MAAEVVGGAFLSAFLQVVFDRLGTTSSTNNCFGSRKLVDQLLHDLKINLISVNEVLDDAEAREYTSSNVKEWLQELKHTVYVADDLLDEIATKAIRLKIEAKTQPATSKVRRFCTCFVNSFDKRMEARIQEVLHDLDLLKEQKDALGLKKISGGRSEIGVGGKVSSRLPTTSLVADESRIYGRDGDKEEIIRLLLNEDLSRGPLSVISVVGMGGSGKTTLAQLVYNDRRMKDQFQLKAWVCVSEEFDVFRITKTILSALDCPITEHEDLNQLQLKLQEKLTGKKLLLVLDDVWNDQKSDLESLQVPFRSGASGSKILVTTRDKKVASAMVSVEVHRIALLNEEDGWKLFEEHAFKNNDASLCSSLQAIGKKIIEKCDGLPLAIKSLGSLLQTKFSENYWNEILESEIWQLPKSNIMPALRLSYHYLPSHLKRCFAFCSIFPKDFEIDKESLIQMWMAEDLIRCNQGNKSVEELGNEILEELESRSFVEKSRFDDDKLIMHDLINDLAKSVSEGFCLMMEGDKVQNNINERIRYCSFSTFVRKDELSLEPIYECEQLRCFATLPREMYGPIGGKVEVEMFSRFKHLRVLSLNLVSTITKLSDGIRNLKHLRYLDLSRSRIKKLPDSIGTVYNLQTLKLICCREIVELPEDLYKLMNLHYLDLSGTGISKLPDSICKVLSLQSLKLGGCRSLAELPADLHNLINLRHLDLVGTNIREMSINIGRMEHLQVLTRFCVGKQSWPNIRELGKFNIRELGRLEIFELDNINDPMDAKVANMKEKNHLKNLTLRWSGNNVDSQNEMSVLEALQPHINLNHLVIKNYGGTRFADWMDAPYLPNLVSVDLRACKYCFCLPPLGQLPSLKMLRISKLEGIKEIGSEFYGENLSIAPFPSLENLLIKDMGELEEWKHFEGECFPRLELMFIESCPKLRKSLPLRLPCLGYLLITGCEGLELESFPIKHSSYPKLENITLSGMTHLKSLLEDMHAQLPCLRSLELKRCPQLQLVPQRGFPSSLVRISIKSCPKLIACRMSWGLHKLHSLQELSVGGHDFEDAASFLEEQHLPPNLTSLFLNGCSNLTKINNNGLLSLTSLRSLEIWDCPNLHSFPEEGLPDSLSSIHIGGNSPLLKQRYQQKVDGPGWHKISHIPEVYMD 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2969 1148 Gene3D Ribonuclease Inhibitor 648 737 IPR032675 -
Prci6g2969 1148 PRINTS Disease resistance protein signature 376 390 - -
Prci6g2969 1148 PRINTS Disease resistance protein signature 279 293 - -
Prci6g2969 1148 PRINTS Disease resistance protein signature 604 620 - -
Prci6g2969 1148 PRINTS Disease resistance protein signature 206 221 - -
Prci6g2969 1148 Gene3D Ribonuclease Inhibitor 738 931 IPR032675 -
Prci6g2969 1148 Gene3D Ribonuclease Inhibitor 932 1005 IPR032675 -
Prci6g2969 1148 Gene3D Ribonuclease Inhibitor 1006 1130 IPR032675 -
Prci6g2969 1148 FunFam Probable disease resistance protein At1g63360 423 509 - -
Prci6g2969 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 437 IPR027417 -
Prci6g2969 1148 SMART LRR_typ_2 700 723 IPR003591 -
Prci6g2969 1148 SMART LRR_typ_2 653 676 IPR003591 -
Prci6g2969 1148 SMART LRR_typ_2 606 629 IPR003591 -
Prci6g2969 1148 FunFam Probable disease resistance protein At1g61300 164 333 - -
Prci6g2969 1148 Gene3D - 163 334 IPR027417 -
Prci6g2969 1148 Gene3D - 422 510 IPR036388 -
Prci6g2969 1148 SUPERFAMILY RNI-like 572 897 - -
Prci6g2969 1148 Gene3D Ribonuclease Inhibitor 572 647 IPR032675 -
Prci6g2969 1148 Gene3D - 15 130 - -
Prci6g2969 1148 Pfam Rx N-terminal domain 10 104 IPR041118 -
Prci6g2969 1148 Coils Coil 122 142 - -
Prci6g2969 1148 Gene3D - 339 421 IPR042197 -
Prci6g2969 1148 Pfam NB-ARC domain 186 404 IPR002182 GO:0043531
Prci6g2969 1148 PANTHER DISEASE RESISTANCE PROTEIN RP 654 907 IPR044974 GO:0006952
Prci6g2969 1148 Coils Coil 42 62 - -
Prci6g2969 1148 SUPERFAMILY RNI-like 933 1119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2969 Prci-Chr6 43221971 43231860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2969 199 729 WRKY Transcription Factor Family AT5G45050 23.408 2.36e-15 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2969 - - pcin:129313083 1625.91