Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2960 ATGGTTACTTGTGAAGTATCTAACAAGATTAATCGCACTCATTTGGATGTTACCAACTATCCAGTTGGACTTGTGTCTCGAATAGAAGAAGTAATCTCACTTTTAGATCTTTGGTCCAATGAAGTCAACATGATTGGAATCTGTGGCACTGGTGGGATTGGTAAATCAACACTTGCAAGAGCTGTGTATAACTCAATTGCTGATCATTTTGATGGTTTATGTTTTCTTTCTAATATTAGAGAAAATTCTAACAAGCATGACTTGTCCAATCTCCAAGAGACAATACTTTATGAATTGGTGAAGGAGAAGGAACTCAAGTTGGGTGATTTCCATAAAGGAATTTCAATAATGGAACATAGGCTTCAACAAAAGAAGATTCTTTTAATCCTTGATGATGTTGATAAATTGAAGCAGTTAAAAGCACTTGCTGGAAGATGTGACTGGTTTGGCTCTGGAAGTAGAATCATCATTACAACAAGGGACAAACAGCTCCTAGCAAGTCATGGGGTTCATAAAATTTATGCTGTCAAGAAATTAAGTTATAAGGAGTCTCTTCAGTTGATTAAATGGAATGCTTTCAAAAAGGTCATTATGAATTCAGATTACATAGATGTTTTAAATCGTGCAATTAATTATTCATGTGGCCTTCCATTGGCCTTGGAAGTGATTGGCTCTAACTTATGTGATAAAATAGTTGATAAATGGAGTTCTGCACTAGATGAGTATGAAAGAATACCTGCTACAGAAGTTTTTGAAGTCCTTAAATTAAGTTATGATGCTTTGGAAGAAACACATCAAGAATTTTTTCTTGACATGGCTTGTTTCTTTAATGGAGAGAAATTAGAAGATGTCAAAAATGTGTTGAAGATTATACGTGGTGTCGAACCAACTTATGCTATTGAAGTGTTGACTGATAGATCTCTAATAAAGATTAAAAAAGATCGTGTGACAATGCACGACTTGATAGAAGATATGGGTAAAGAAATTGTTCGGCGACAATCACCAAGAGAACCTGGTAATCGCAGCAGGTTATGGTCTTATGAGGACATTATTCACGTGTTGCAAAATGACACAGGATCCAAAGAAATTGAAGTCATGATTCTTGATTTGCCTAAAGGTGAAGAAATTCAATGGAGTGGAGAGGAATTCAGAAGGATGAAGAACCTCAAATTTCTTGCCATAAAATGTGCAAGTTTTTCTGAAGTCCCCAAATATCTCCCAAATAGTTTATGTTTGCTAGAATGGAAGGGGTATCCTTTAGAGCTCTTGCCTTCTAATTTTTGTCCAACTCAACTTGTCCAATTAGACTTGTCCAATAGTTGTTTTGCAAACCTCCAACCATTTATTAAGAAATTTGAGAGTTTAAGTCACATGAATTTTAGCAAGTGCAAATTCCTAAGTCAGATACCAAACTTGACAGGAGCTTCTAATTTAAAAGAATTGCGGCTTGATGGTTGTACAAGTTTAATTGAAATTGATGATTCAGTTGGATCCTTGGATAATCTTAAAGAATTGAGTGCCATGCGATGCAAAAATTTGAAAAAATTTCCTGCTACTATTAAGTTGAGATCCTTGGAACATTTAAGTCTCTATGGTTGTTCAAGTCTTCAAAGTTTTCCAGATATATCAGAAAAGATGGAGAAGTTAAGAACACTTGATTTGGAGGGAACATCCATCCCAAGATTGCCATTTTCAATTCACAATCTCATTGGGCTTGAAAGCTTAAACATGGATGCATGCCCTAATCTTGTGCAATTACCGGCTAGTATTTGTATGTTGCCAAACCTTTCAGAAGTAACAGCAAATTTTTGTGAAGGGATGAGGCATTTTGAGATGTGCAGAGGTGGAAAAGAAGGAAGCTTAGAAAGCTCATCAATATCTTTGAAATTGAAGCAATTCTGTTTCTCAAAATGCGATTTGTCAGATGATTCTCTTTCTCTTTGTCTATCTTACATCCCTGGCATTGTATGTTTAGATCTAAGGTTTAATAATTTTACAACCCTACCAGCATGCATCAAAGAATGTAGGCATTTAAAAAATCTTTTGCTGGATTATTGTATGCAACTTCAACATATTGAGAGGATGCCACCAAACTTGGAACAATTCAGTGCCATAGGTTGTACTTCATTCTCCAAGTTATCCAAGAGCAGAGTATTGAATCAGGCATTCTATTTTGAACCAGGGAAAAGAAACTTTATTTTTCCAGGAAAGAGAATCCCCGAGTGGCTTGACTATTATAGTCGAGGAGGCTCCATGTCCTTTTGGATTCGTAATGAATTCCCAACAATTTTTATTTGGTTTCTTGTTGAAAATGACCAAGATTCTCCATACAAGTGTATGTTCTCAGTGCACATTAATGACATCAAGCTAGAAATTAATTCTTCGGAGTGGCTTTTACTGTCATCAATAAAGGCTAATCATATATACATATTTGAGCTACAAAGCATACTTCAAAAGGCTGAACTCCCTCGTGTAAATAAATGGAATCAAGTTAAGGTTTCCATCAAGAGCAGTGCACAAGAAATGAAAGAGGAAAAGGAAACTCATATTGCAGTTCATGTATATCGGCAACAAAGCAACTTAGATGATATCCGATTCAGGGATCCCAAAACATTCCTTGACAACAATTCATGGCAAAAGCTACGACCCCCAACCAAAGATTGGGAAGGACTTGAAGCTGTCATGCATTACAAAGATATCAGGGTTGTTGAATTTGCAAAACAAAAGGAAGTCCTGGGATCGAAGGAAGGCTTTGGCGATGATAGTGGAGTTGGAGTTTATCAGGAAGTACCCACCAAATTTCCAACTACATCTGTGGTGTCTGATGAGTCCATCATACGTAGTAGGAATAGTGATAAAGAAAAAATGTTTGAACTTTTTGCTGGATTAGTTAGAGTGATTATTGTTAATCACTTAATTGCTGAATCATCCTGA 2934 0.3609 MVTCEVSNKINRTHLDVTNYPVGLVSRIEEVISLLDLWSNEVNMIGICGTGGIGKSTLARAVYNSIADHFDGLCFLSNIRENSNKHDLSNLQETILYELVKEKELKLGDFHKGISIMEHRLQQKKILLILDDVDKLKQLKALAGRCDWFGSGSRIIITTRDKQLLASHGVHKIYAVKKLSYKESLQLIKWNAFKKVIMNSDYIDVLNRAINYSCGLPLALEVIGSNLCDKIVDKWSSALDEYERIPATEVFEVLKLSYDALEETHQEFFLDMACFFNGEKLEDVKNVLKIIRGVEPTYAIEVLTDRSLIKIKKDRVTMHDLIEDMGKEIVRRQSPREPGNRSRLWSYEDIIHVLQNDTGSKEIEVMILDLPKGEEIQWSGEEFRRMKNLKFLAIKCASFSEVPKYLPNSLCLLEWKGYPLELLPSNFCPTQLVQLDLSNSCFANLQPFIKKFESLSHMNFSKCKFLSQIPNLTGASNLKELRLDGCTSLIEIDDSVGSLDNLKELSAMRCKNLKKFPATIKLRSLEHLSLYGCSSLQSFPDISEKMEKLRTLDLEGTSIPRLPFSIHNLIGLESLNMDACPNLVQLPASICMLPNLSEVTANFCEGMRHFEMCRGGKEGSLESSSISLKLKQFCFSKCDLSDDSLSLCLSYIPGIVCLDLRFNNFTTLPACIKECRHLKNLLLDYCMQLQHIERMPPNLEQFSAIGCTSFSKLSKSRVLNQAFYFEPGKRNFIFPGKRIPEWLDYYSRGGSMSFWIRNEFPTIFIWFLVENDQDSPYKCMFSVHINDIKLEINSSEWLLLSSIKANHIYIFELQSILQKAELPRVNKWNQVKVSIKSSAQEMKEEKETHIAVHVYRQQSNLDDIRFRDPKTFLDNNSWQKLRPPTKDWEGLEAVMHYKDIRVVEFAKQKEVLGSKEGFGDDSGVGVYQEVPTKFPTTSVVSDESIIRSRNSDKEKMFELFAGLVRVIIVNHLIAESS 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2960 977 Gene3D Ribonuclease Inhibitor 544 851 IPR032675 -
Prci6g2960 977 PRINTS Disease resistance protein signature 213 227 - -
Prci6g2960 977 PRINTS Disease resistance protein signature 120 134 - -
Prci6g2960 977 PRINTS Disease resistance protein signature 44 59 - -
Prci6g2960 977 PRINTS Disease resistance protein signature 520 536 - -
Prci6g2960 977 SUPERFAMILY L domain-like 332 719 - -
Prci6g2960 977 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 597 IPR044974 GO:0006952
Prci6g2960 977 Gene3D - 5 173 IPR027417 -
Prci6g2960 977 SUPERFAMILY "Winged helix" DNA-binding domain 249 355 IPR036390 -
Prci6g2960 977 Gene3D - 178 262 IPR042197 -
Prci6g2960 977 Pfam NB-ARC domain 28 258 IPR002182 GO:0043531
Prci6g2960 977 Gene3D Ribonuclease Inhibitor 360 543 IPR032675 -
Prci6g2960 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 271 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2960 Prci-Chr6 43066071 43071743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2960 22 610 WRKY Transcription Factor Family AT4G12020 32.566 1.45e-78 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2960 - - pcin:129295352 983.015