Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2947 ATGGCTGCTGAGTTTGTGGGTGGAGCATTTCTCTCTTCTGCTCTTCAAGTCGCTTTTGAAAAGCTGGCTTCTTCTGACGTCACTGACTACTTCCGATCAAGAAACCTGAAAGATGGCTTGATCAAAGACCTTCACACCACTCTCATCTGTGTGAATCGAGTGCTTGATGATGCAGAAGCAAAGCAGTACACAAACTCCGATGTCAAGAAGTGGCTTCATGAGTTCAAACATGCTGTGTATGTGGCCGATGACCTCTTAGATGAGATTGCCATTAAGGCTATCAGGTTGAAGTTCGAAGTTGAGAGTCAAACAGCTACCAGTAAGGTACGAGGCTTCTTCACTTCTTTTGTTAGTCCATTTGACAAACAGATCGAATCTAGGATTCAACAAGTTCTTCACGACCTGGAGAACCTTCGAAAACAAAGGGGTGATCTAGGATTGAAGGAAGGCTGTCGTGCTGGTAGCAAAGTTGGAGTTGGTGGGAAAGTATCCTCTAGATTGCCAACTACATCTCTGGTGGCTGATGAGTCACGCATATATGGCAGAGATGGTGATAAAGAAGAAATAATTCGTCTTTTACTTGATGAAGATCTGAGCAGGGACCCACTATCTGTGATTTCTGTAGTGGGTATGGGTGGGTCGGGGAAAACCACTCTTGCTCAATTGGTGTACAATGATGGGAGGATGAAGGATCAATTTCAACTCAATGCTTGGGTGTGCGTTTCCGAAGAATTTGATGTTCTTGGAATTACAAAAACAATACTTTCTGCACTTAAATGTCGAATAACAGGATATGAAGGTCTAAATCAGCTTCAATTGAAACTGAAAGAGAAATTGATGGGGAAGAAATTTTTGCTGGTTCTTGATGATGTCTGGAATGACCAGCAATACGAGTTGGAATCATTACAAGTTCCTTTTCGTTCTGGGGCTTCTGGAAGCAAGATCCTTGTTACAACACGTGATAAAAAGGTAGCATCAGCCATGGTCTCTGTTGAAGTGCATCGCATAGCTTTACTAAATGAAGAAGATGGTTGGAAGTTATTTGAGGAACATGCGTTCAAAAACAACGATGCTAGCTCGTGTTCAAGTCTACAGGCAATTGGCAAAAAAATTGTTGAAAAGTGCGACGGGTTGCCTCTAGCCATAAAATCATTGGGTGGCCTCTTGCAAACAAAATTTTCAGAGAAATATTGGAATGAAATTCTTGAGAGTGAGATATGGCAGTTACCAAAGAGTAACATAATGCCAGCTCTACGGCTAAGCTATGATTATCTTCCTTCTCATTTGAAGAGGTGTTTTGCGTTCTGTTCTATATTTCCTAAAGACTTTGAAATTGACAAGGAATCTCTAATCCAAATGTGGATGGCAGAGGATTTGATACGTTGCAACCAAGGAAATAAAAGTGTGGAGGAATTGGGGAATGAAATTTTGGAAGAACTAGAATCAAGGTCATTTGTTGAGAAATCAAGATTTGATGATGACAAATTAATCATGCATGACCTGATAAATGATTTAGCGAAATCAGTCTCCGAAGGATTTTGTTTGATGATGGAGGGTGATAAGGTGCAAAATAATATTAATGAAAGGATACGCTACTGTTCATTCTCAATTTTCGTCCCCAAGTTCGAAGAATTATCATTGGAACCTATTTACGAGTGTAAGCACTTACGATGTTTTGCTAGTCTACCACGAGAAAACGTTCTTATTGGTGGTAAGGTTGAGGTTGAAACGTTTTCAAGATTTAAGCACCTGCGAATTTTGAGCTTGGAGCGAGTTTCAACTAGCACTAAATTAAGTGATGTTATAAGGAATTTAAAGCACCTTCGCTACTTAGACCTCTCTCATAGTCATATTAAAAAGTTACCCGATTCAATCTGCACTATGTATAATTTACGAACTTTGAAATTGATCTGGTGCAGTGAAATTGTTGAGTTACCTGAGGATTTGTGCAAATTAATCAATTTGCATTATCTAGACCTTTCTCGTACTAGGATCAGCAAGTTACCTGATTCAATTTGTAAGGTGCACAGTTTGCAAACGTTGAGATTGCAATGGTGTAAGTCTTTGGCTGAATTGCCACCAGATTTGCACAATCTCATCAATCTTCGACATCTTGATTTGTTTGGGACTAATATAAGGGAGATGTCAATGAACATTGGAAGGATGGAACATCTTCAAGTATTGACAAGATTTTGTGTGGGAAAGCAAAGCTGGTCCAATATTAGAGAGTTAAGAAAATTCAATATTAGAGAGTCAGTCAGTCTTGAGATTTTTGAGTTGGATAACATCAATGATCCAATGGATGCCGGGGTGGCCAATGTGAAAGAGAAGAATCACTTGAATGAGTTAACTTTGGAATGGAGTGGAAAAAATGTGGATTCACAAAATGAAATGTCTGTTTTGAAGGCTCTTCAACCTCATATCAACTTGAAACGCCTTGCTATTAGAAACTATGGTGGCGCAAGGTTTGCGGACTGGATGGATGCTCCTTATCTACCTAATTTAGTATATCTTGGGTTGAGTGCATGTAAATATTGCTTTTGTTTACCACCACTTGGGCGGCTGCCCTCTCTAGAGAGGCTTGACATTTCTCATTTAGAAGGAATAAAGGAGATTGGGTCAGATTTTTACGGGGAGAATTTGTCAATTGCTGCGTTTCCATCCCTTGAACATTTGGCAATTGAAGATATGGGGGAATTGGAAGAATGGAAGCATTTTGAAGGTGAATGTTTTCCTCGCCTTAAACTCATGTACATAAAAAGCTGTCCGAAATTGAGGAAATCCCTTCCTCTATGCCTTCCATGCTTGGAATATCTACGTATTAGAGGATGTGAAGGCTTGGAACTTGAATCATTCCCTCTGAAAGATTCCTCTTATCCGAAACTTGAATGGATCACCCTTGATGATATGATCCAACTGAAGTCACTTCATGAAGACATGCATGCACAGCTCCCCTATCTTCGTGAATTAGCTCTAAGGAGCTGTCCACAGCTGCAATTGGTTCCTCAGAGAGGTTTTCCTTCGAGCCTTGTCTACATTCAAATATATCGTTGTCCGAAACTCATAGCTTGTCGTATGAGCTGGGGCTTGCACAGGCTTCATTCTCTACAAAGCTTAGAAGTGCGTGATCATGATTTTGAAAATGCCGAGTCTTTCTTAGAAGAGCAACATTTGCCGCCCAATCTTGTAATTCTTTATCTTGTTGGATGTTCAAATTTGACAAAAATAAACAACAATGGCCTTCTCTCCCTCACATCTCTTCGACGCTTAGAGATTAAGGATTGCCCAAATCTCGAGTGCTTGCCAGAGGAAGGTTTACCCAACTCCCTTTTTGAAATATCTATTAAAGGAAACAGTCCATTACTAAAGCAGCGGTACCAAAAAGTGGGTGGACCAGGCTGGCATAAAATTTCTCACATTCCAGAGGTGTATATAGATTAG 3441 0.4013 MAAEFVGGAFLSSALQVAFEKLASSDVTDYFRSRNLKDGLIKDLHTTLICVNRVLDDAEAKQYTNSDVKKWLHEFKHAVYVADDLLDEIAIKAIRLKFEVESQTATSKVRGFFTSFVSPFDKQIESRIQQVLHDLENLRKQRGDLGLKEGCRAGSKVGVGGKVSSRLPTTSLVADESRIYGRDGDKEEIIRLLLDEDLSRDPLSVISVVGMGGSGKTTLAQLVYNDGRMKDQFQLNAWVCVSEEFDVLGITKTILSALKCRITGYEGLNQLQLKLKEKLMGKKFLLVLDDVWNDQQYELESLQVPFRSGASGSKILVTTRDKKVASAMVSVEVHRIALLNEEDGWKLFEEHAFKNNDASSCSSLQAIGKKIVEKCDGLPLAIKSLGGLLQTKFSEKYWNEILESEIWQLPKSNIMPALRLSYDYLPSHLKRCFAFCSIFPKDFEIDKESLIQMWMAEDLIRCNQGNKSVEELGNEILEELESRSFVEKSRFDDDKLIMHDLINDLAKSVSEGFCLMMEGDKVQNNINERIRYCSFSIFVPKFEELSLEPIYECKHLRCFASLPRENVLIGGKVEVETFSRFKHLRILSLERVSTSTKLSDVIRNLKHLRYLDLSHSHIKKLPDSICTMYNLRTLKLIWCSEIVELPEDLCKLINLHYLDLSRTRISKLPDSICKVHSLQTLRLQWCKSLAELPPDLHNLINLRHLDLFGTNIREMSMNIGRMEHLQVLTRFCVGKQSWSNIRELRKFNIRESVSLEIFELDNINDPMDAGVANVKEKNHLNELTLEWSGKNVDSQNEMSVLKALQPHINLKRLAIRNYGGARFADWMDAPYLPNLVYLGLSACKYCFCLPPLGRLPSLERLDISHLEGIKEIGSDFYGENLSIAAFPSLEHLAIEDMGELEEWKHFEGECFPRLKLMYIKSCPKLRKSLPLCLPCLEYLRIRGCEGLELESFPLKDSSYPKLEWITLDDMIQLKSLHEDMHAQLPYLRELALRSCPQLQLVPQRGFPSSLVYIQIYRCPKLIACRMSWGLHRLHSLQSLEVRDHDFENAESFLEEQHLPPNLVILYLVGCSNLTKINNNGLLSLTSLRRLEIKDCPNLECLPEEGLPNSLFEISIKGNSPLLKQRYQKVGGPGWHKISHIPEVYID 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2947 1146 Coils Coil 121 141 - -
Prci6g2947 1146 Gene3D Ribonuclease Inhibitor 641 733 IPR032675 -
Prci6g2947 1146 Pfam NB-ARC domain 185 404 IPR002182 GO:0043531
Prci6g2947 1146 Gene3D Ribonuclease Inhibitor 552 640 IPR032675 -
Prci6g2947 1146 ProSiteProfiles Leucine-rich repeat profile. 654 675 IPR001611 GO:0005515
Prci6g2947 1146 ProSiteProfiles Leucine-rich repeat profile. 607 628 IPR001611 GO:0005515
Prci6g2947 1146 FunFam Probable disease resistance protein At1g61300 163 332 - -
Prci6g2947 1146 SUPERFAMILY RNI-like 933 1118 - -
Prci6g2947 1146 Gene3D - 427 508 IPR036388 -
Prci6g2947 1146 FunFam Probable disease resistance protein At1g63360 422 508 - -
Prci6g2947 1146 Gene3D - 13 129 - -
Prci6g2947 1146 PANTHER DISEASE RESISTANCE PROTEIN RP 650 900 IPR044974 GO:0006952
Prci6g2947 1146 Gene3D - 338 426 IPR042197 -
Prci6g2947 1146 Pfam Rx N-terminal domain 10 102 IPR041118 -
Prci6g2947 1146 PRINTS Disease resistance protein signature 205 220 - -
Prci6g2947 1146 PRINTS Disease resistance protein signature 375 389 - -
Prci6g2947 1146 PRINTS Disease resistance protein signature 278 292 - -
Prci6g2947 1146 PRINTS Disease resistance protein signature 603 619 - -
Prci6g2947 1146 SUPERFAMILY L domain-like 498 946 - -
Prci6g2947 1146 Gene3D Ribonuclease Inhibitor 735 930 IPR032675 -
Prci6g2947 1146 Gene3D Ribonuclease Inhibitor 1005 1114 IPR032675 -
Prci6g2947 1146 Gene3D Ribonuclease Inhibitor 931 1004 IPR032675 -
Prci6g2947 1146 Gene3D - 162 333 IPR027417 -
Prci6g2947 1146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 436 IPR027417 -
Prci6g2947 1146 SMART LRR_typ_2 605 628 IPR003591 -
Prci6g2947 1146 SMART LRR_typ_2 699 722 IPR003591 -
Prci6g2947 1146 SMART LRR_typ_2 652 675 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2947 Prci-Chr6 43017549 43029196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2947 192 729 WRKY Transcription Factor Family AT5G45050 24.174 7.71e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2947 - - pcin:129313083 1634.77