Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2945 ATGGCTGCTGAGCTTGTGGGTGGAGCATTTCTCTCTGCCGCTGTTCAAGTTGCTTTTCAAAGGCTGGCGTCTTCTGACATCACAAACTATTTTCAATCAAGAAAGCTCAAGGATAGCTTGTTCAGCAAACTTGAAATCACTCTCATTTCATTGAATCAAGTGCTTGATGATGCAGAAGCAAGGCAATACACAAAGCCCAATATCAAGAAGTGGCTTCATGAGCTCAAACATGTTGTGTATGTGGCCGATGAACTCTTAGATGAGATTGCTACTGAGGCAACCAGGTTGAAGTTCGAAGCTCAGAATGAAACTGCTACCAGTAAGGATGTTCTGGGATTGAAGGAAGGTTCCTGTGGTGGTAGTGAAGTTCGAATTAGGAAAGTCTCCAACAGATTGCCAACTGCATCTTTGGTGGCTGATGAGTCCGGCATATATGGTAGAGATGGTGATAAAGAAAAAATGATTGAGCTTTTGCTTAATGATGATTTGAGTAGGAACCAAGTTTCTGTGATTTCTATAGTGGGTATGGGTGGTTTAGGTAAGACTACCCTTGCTCAATTAGTGTACAGCAACAATAGGGTGGAGAATCAGTTTCAACTCAAAGCTTGGGTGTGTATTTCAGAAGAATTTGATGTTGTTAGAATTACTCAAACAATTCTTTCTGCACTTGGATGCTTAGTAACTGCATATGAAGACCTTAATCAGCTTCAGTTGAAATTGAAAGAGAAATTGGTGGGGAAGAAATTTTTGCTGGTGCTTGATGATGTTTGGAATGAGCGCCAATCTGATTGGGAAGCCTTTCAAGTTCCTTTTTTCTATGGGACATTAGGAAGTAAGATCATTGTTACAACACGTAGTGAAAAAGTAGCATCAGTTGTGTGCTCTAGTAGAGTGTTCCGCATGACTTTATTAAATGAAGAAGATGGTTGGAAGTTATTTGCAGAATATGCATTCAGAAATAAGGATGATAGCATGTGGACAAATCTTGAGTCAATAGGTAAAAAAATTGTTGAAAAGTGCAAAGGATTGCCTTTAGCTATAAAAACACTGGGTGGCCTCTTGCATACAAAATCATCAGAGAAACAATGGAATGACATTCTTAATAGTGAAATATGGCAATTGCTAGATGATGAGAGTGATGTAATACCAGCTTTGAGATTAAGCTATCATTACCTTCCTTCTAATTTGAAGCAGTGTTTTGCATTTTGTTCTATATTTCCTAAAGACTACAAAATTGAGAAGGATTCTCTAATCCAAATGTGGATGGCAGAAGATTTGTTGCATTGCAATCAAGGAAATAAAAATGTGGAAGAAATGGGAAGTCAAATCCTGGTTGAACTAGAATCGAGGTCGTTTCTCCAAAAGTCAAAAATTCATAATAGGCATGTCAATATTTGGTTGAATTGCCACCTGGTTTACACAATCTCATTAATCTCCATCATCTTGATATAA 1452 0.3815 MAAELVGGAFLSAAVQVAFQRLASSDITNYFQSRKLKDSLFSKLEITLISLNQVLDDAEARQYTKPNIKKWLHELKHVVYVADELLDEIATEATRLKFEAQNETATSKDVLGLKEGSCGGSEVRIRKVSNRLPTASLVADESGIYGRDGDKEKMIELLLNDDLSRNQVSVISIVGMGGLGKTTLAQLVYSNNRVENQFQLKAWVCISEEFDVVRITQTILSALGCLVTAYEDLNQLQLKLKEKLVGKKFLLVLDDVWNERQSDWEAFQVPFFYGTLGSKIIVTTRSEKVASVVCSSRVFRMTLLNEEDGWKLFAEYAFRNKDDSMWTNLESIGKKIVEKCKGLPLAIKTLGGLLHTKSSEKQWNDILNSEIWQLLDDESDVIPALRLSYHYLPSNLKQCFAFCSIFPKDYKIEKDSLIQMWMAEDLLHCNQGNKNVEEMGSQILVELESRSFLQKSKIHNRHVNIWLNCHLVYTISLISIILI 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2945 483 FunFam Probable disease resistance protein At1g61300 127 296 - -
Prci6g2945 483 Gene3D - 125 298 IPR027417 -
Prci6g2945 483 Pfam NB-ARC domain 150 368 IPR002182 GO:0043531
Prci6g2945 483 Gene3D - 303 387 IPR042197 -
Prci6g2945 483 PANTHER DISEASE RESISTANCE PROTEIN RP 44 460 IPR044974 GO:0006952
Prci6g2945 483 Coils Coil 41 61 - -
Prci6g2945 483 Pfam Rx N-terminal domain 10 103 IPR041118 -
Prci6g2945 483 FunFam Probable disease resistance protein At1g63360 389 473 - -
Prci6g2945 483 Gene3D - 388 474 IPR036388 -
Prci6g2945 483 FunFam Probable disease resistance protein At5g66910 303 388 - -
Prci6g2945 483 PRINTS Disease resistance protein signature 170 185 - -
Prci6g2945 483 PRINTS Disease resistance protein signature 243 257 - -
Prci6g2945 483 PRINTS Disease resistance protein signature 340 354 - -
Prci6g2945 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 403 IPR027417 -
Prci6g2945 483 Gene3D - 13 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2945 Prci-Chr6 43006703 43009038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2945 143 357 WRKY Transcription Factor Family AT5G45050 28.444 1.40e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2945 - - pcin:129314542 928.317