Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2935 ATGGCTACGTCGACTAGCTTCTTGTGCAGTAGAACCCCGGCAAAATGGGCTTCAAAACGCTCATCACCTTCATTTGGCTTCCAACAACCCATTCGAAACGTCCCAACGGCAGCAATAATGAAACTAAGCTTTCCAGTAACACCAAAAGCAGAAGACGACGTCGATTTAAATGTTCCCGGCAGTGGACTTGAACCCCAGATAGAAGAACAGGAGGAGGTCCAAGGCATTGAGAGAGGGAGAGAAAGTAGCATTGAGGCACCGCTCAACGTGAGTGGTATCTACCAGAATGGAGACCCACTCGGGCGGAAGGATATGGAGCCGATTGAGTTCTTGGTTAGCCATGGTCAGGCTCAACAAGAACTCTGTGACACTATTTGTAATTTAAATGCCATCAGTACATCTACAGGATTGGGAGGAATGCATTTGGTTTTATTCAAGGTTGAAGGGAACCACCGGTTACCACCTACTACACTTTCACCTGGAGACATGGTTTGTGTGAGAACATGTGATAACAGGGGCACAGTCACAACCTCTTGCCTGCAAGGCTTTGTTAACAATCTTGGGGATGACGGCTGTAGTATCAGTGTTGCTTTAGAGTCACGCTATGGTGATCCCACATTCTCTAAACTCTTTGGGAAGAGTGTGCGTATTGACCGAATCCAAGGACTGGCCGATACTCTTACCTATGAGCGCAACTGTGAAGCCTTAATGCTGCTTCAGAAGAATGTTCTACGAAAGAAGAATCCTTCTATTGCTGTTGTGGCTACACTGTTTGGAGACAGGGAAGATTTTGCTTGGCTTGAGAAAAATCATATAGGTGATTGGGGTGAAGAAAACATAAACGGACTGTTAGGAAGTGAAAGCTTTGATAATTCCCAGCAAAGAGCAATAGCACTAGGTAATAAAAATAAAAATAGGCCTGTATTGGTTATCCAAGGGCCTCCTGGTACAGGGAAGACAGGTTTGCTCAAGCAACTTATAGCATATGCTGTTCAGCGAGGTGAAAGGGTTCTTGTAACAGCACCTACTAATGCAGCTATTGATAACATGGTGGAAAAGCTTTCAAATATTGGATTAAACATTGTGCGGGTTGGCAACCCTGCTCGTATATCAAAAACTGTGGGTTCAAAGTCTCTAGGAGAAATTGTAAATGCTAAGCTTGGAAGTTTTCGAGCTGAGTATGAAAGGAAGAAGTCAGATCTAAGGAGAGATCTTAGATATTGCTTAAAAGATGATTCATTAGCAGCTGGCATACGTCAACTTCTGAAACAGTTGGGAAGGTCACTGAAGAGGAAGGAAAAGGAAACTATGAACGAGGTGCTATCTAATGCTCAAGTTGTGCTTGCCACAAATACTGGTTCAGCTGATCCATTGATTCGAAAGCTAGATGCTTTTGACTTGGTTGTTATAGATGAAGCTGGACAGGCAATTGAACCTTCTTGCTGGATTCCCATATTGCAGGGAAAGCGTTGCATTCTTGCTGGTGATCAATGCCAACTTGCTCCAGTCATATTATCTAGAAAGGCTTTGGAAGGAGGTCTTGGAATATCATTACTGGAGAGGGCTACAACTTTGCATGAAGGGGTTCTCACCACAAGCTTAACAATACAATACCGTATGAATGATGCAATTGCTAGTTGGGCATCAAAGGAGATGTATGGTGGACTATTGAAGTCCTCTGAGAATGTCTTTTATCATCTTCTTGTGGACTCTCCTTTTGTCAAGCCTACATGGATAACACAGTGTCCTCTGTTGTTGCTCGATACAAGAATGCCATATGGAAGTCTGTCAATTGGTTGCGAAGAGCATCTAGACCCAGCTGGAACAGGTTCATTTTATAATGAAGGAGAAGCTGATATTGTTGTGCAGCATGTCTTTTCCTTAATTTGTGCTGGTGTCAACCCAACAGCTATTATGGTGCAATCTCCTTATGTTGCTCAAGTACAACTTTTGAGGGACATGCTGGATGAGCTGCCAGAGGCTGCTGGTACTGAGGTTGCAACAATTGATAGCTTTCAAGGACGGGAAGCAGATGCAGTAATTATATCCATGGTACGTTCAAATGCTTTAGGTGCTGTTGGATTCCTAGGTGATAGCAGAAGAATCAATGTTGCCATCACGAGGGCACGCAAACATGTAGCAGTGGTATGTGACAGCTCCACAGTTTGCCATAATACCTTCTTAGCAAGACTTCTACGTCACATCCGGCATTTCGGTAGGGTGAAACATGCAGAACCCGGTCGTTCTGGAGGTTCCGGGCTGGGCATGAATCCAATGTTACCCTCCGTTAATTAG 2295 0.441 MATSTSFLCSRTPAKWASKRSSPSFGFQQPIRNVPTAAIMKLSFPVTPKAEDDVDLNVPGSGLEPQIEEQEEVQGIERGRESSIEAPLNVSGIYQNGDPLGRKDMEPIEFLVSHGQAQQELCDTICNLNAISTSTGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTCDNRGTVTTSCLQGFVNNLGDDGCSISVALESRYGDPTFSKLFGKSVRIDRIQGLADTLTYERNCEALMLLQKNVLRKKNPSIAVVATLFGDREDFAWLEKNHIGDWGEENINGLLGSESFDNSQQRAIALGNKNKNRPVLVIQGPPGTGKTGLLKQLIAYAVQRGERVLVTAPTNAAIDNMVEKLSNIGLNIVRVGNPARISKTVGSKSLGEIVNAKLGSFRAEYERKKSDLRRDLRYCLKDDSLAAGIRQLLKQLGRSLKRKEKETMNEVLSNAQVVLATNTGSADPLIRKLDAFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGISLLERATTLHEGVLTTSLTIQYRMNDAIASWASKEMYGGLLKSSENVFYHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSIGCEEHLDPAGTGSFYNEGEADIVVQHVFSLICAGVNPTAIMVQSPYVAQVQLLRDMLDELPEAAGTEVATIDSFQGREADAVIISMVRSNALGAVGFLGDSRRINVAITRARKHVAVVCDSSTVCHNTFLARLLRHIRHFGRVKHAEPGRSGGSGLGMNPMLPSVN 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2935 764 FunFam DNA helicase A 538 746 - -
Prci6g2935 764 Coils Coil 415 435 - -
Prci6g2935 764 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 54 747 - -
Prci6g2935 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 288 727 IPR027417 -
Prci6g2935 764 Gene3D - 538 746 IPR027417 -
Prci6g2935 764 Pfam AAA domain 516 719 IPR041679 -
Prci6g2935 764 CDD DEXXQc_SMUBP2 288 539 - -
Prci6g2935 764 Pfam AAA domain 289 506 IPR041677 GO:0004386
Prci6g2935 764 CDD SF1_C_Upf1 540 736 IPR047187 -
Prci6g2935 764 SMART AAA_5 305 520 IPR003593 GO:0016887
Prci6g2935 764 Gene3D - 224 522 IPR027417 -
Prci6g2935 764 Gene3D - 117 223 - -
Prci6g2935 764 SMART ultradead3 285 539 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2935 Prci-Chr6 42680573 42704958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2935 280 479 Core DNA Replication Machinery Family AT1G08840 25.000 1.00e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2935 - - aip:107625008 1180.62