Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2934 ATGGATGGGGTCAGCCCTGATAATGAAGCGGAGCAGTCTCGGTGCAGAGGCGTGGGCGCTGCATCCTCATCTTCAGCATCGACGGGGTTAGGATGGAGGCCCAGCCAGCTTGGGTTTACTCCATATACATGGGCGGGTGAAACTTCGGATAATTCCCAAGCTCTGCGTGTGGTTGTGAGGAAATCCCTGCTCGCAAGATTGACCAAGGAAATAATTGAAACATACCAAATATGCAATCCGGAGTTCAAGTATTCTGAAGAGCTAAATCCAAAAAGATATTTGACCAGCCCGTCAGTTGGAGTGCTTAATGATGGCTTTGATAATGTTAACTCAGATCTTATATTGACAGTGAACTTTGTCTTGGTCAATTTTGAGAGAAATAGAAGATATCTTGTCAAAGATGTCCTTGGCCATGGGACATTTGGACAAGTGGCTAAGTGTTGGGTTTCAGATACCAGCAGCTATGTTGCTGTGAAGATCATCAAAAATCAACCTGCATACTATCAACAGGCATTGGTTGAAGTATCTATTTTGAATACGTTAAACAAGAAGTATGATCCTGAGGATAAGCATCACATTGTTCGTATATATGATTACTTTTTATATCAACGGCATTTGTGTATATGCTTCGAACTTTTGGACACAAACTTGTATGAGCTTATCAAGTTGAACAATTTTAGGGGGTTATCTTTGAGTATTGTTCAGTTGTTCTCTAAGCAGATATTACATGGATTAGCTCTATTAAAAGATGCTGGCATCATTCACTGTGATCTGAAGCCAGAAAACATTCTTCTATGTACAAGTGTGAAGCCAGCAGAAGTCAAGATTATTGACTTTGGATCGGCATGCATGGAAGACCGTACTGTCTACTCCTATATTCAGAGTCGATATTATAGGTCTCCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCTGAATTGTTTCTTGGATTACCATTTCCTGGTGCTTCTGAATTTGATCTTTTGAGGAGGATGATTGAAATTCTCGGGGGACAACCGCCTGATTATGTACTGAGGGAGGCCAAAAACACTGGTAAATTTTTCAAGTGTATTGGGAATCTCCAGAATGGAGAGAACAGCGAGATTCCATCACATGGAAGAAGTTCTTATCAAGCATTGACTGAGGAAGAATATGAAGCTAGAGAATTGAAGAAGCCATCAATTGGGAAAGAGTATTTCAATCATATGAATCTTGAAGAAATTGTTACCCACTATCCCTATAGGAAAAACTTGCCGGAGGAAGATATTCTTAGAGAGAGTCAAATACGATTGGCATTAATTGATTTTTTGAGAGGGCTAGTTGAATTTGATCCTGCAAAACGCTGGTCACCCTTCCAGGCTTCAAGGCACCCTTTTGTGACAGGGGAACCTTTTACCCATCCTTATGAGCCTCCTCCAGAAACCCCTCGTGTGGCGGTTGTTCAAGCTGTCAAAGTGGATCATCACCCTGGTGGAGGGCACTGGTTTGCTGCTGGTTTATCACCTAATGTTCCTAGCAAAAGTAGGCCTTCACTATATAGCAGCTTGCATTTCCAGATGGTGCAATATCCACCTGCTAACAGCTACGGCAGTGTGGGAAGCCATGGTAGCTATAATGATAGTGTTGGGCTTGGAAGTAGCTATGGAAGTTATGGAGAAAGCAGTAACATGTTTGCATACTGTTCGCCTGTTGGTCCATCTGGTATTCATTTGCTTGGTCATGGCAGTACCTCAATGCTTGGAAATAGTCCTGATGCAAGGAGAAGGGTTGTTCCATACCAGGCAGGGAGTGCTCGAGGCATAAGCCCATCTGCTGGAACTTTCACCCATTTGCCCCTTGGTGCGAGTCCCTCACAATTTACTCCTCCAAGTTCCTATACACAAGTTTCAGCAAGCTCTCCTGGACACTATGGACCTACTTCTCCTGCAAGAGGCACTTCTCATGGATCACCGTTGGGGAAGACATCTACCATTAGCCAGTTTAATAGAAGAAAAAATTGGGGATGTTCTGGAAGTCATCAAACTCAAGATATAACATTTTCTCCACATTGGCAAGTTCAATGTCCTGACAGCTCCATCTATGGTGAAGGAACAGCTCAATTTCTTAGCAGCTCGCCATCTTATCTGCAATCAAATATTGATGCTGCAAGCCGGAAGCAGCGAGGAGGTGGAACTAATCAGAAAATGGCATGTTTGTTTATGCCAAGTTCTAATTCAAACTTGCAACCAACAGAGTTGGGACATGACAACCCAGAGTCTTGCCTATCATTGCCTGATCCTGGTGATTGGGATCCTAATTATAGTGATGAACTACTTCTGCAAGAGGATAGTTCAGATGGAAGCTGCTTGGCAACTGAATTTGGCAGGAGTATGAATATTGGTTCCATGGAACCATTGGTTGGATTTGGAAGGTTCAACCATGCCTTCAGCACAAGCTCTCCTATATCCATTCAGAGACAAAATGGACCGGTTCAGGCATATTCTAATTTCGAGATGGATAGCCCTCCAGCTCATGATGTGCAAGCTGGATACATGCGCTCGATGTCCAAGCCTTGTCATCTCATACCTGGTATTTTGCAAAATTCTCCTAGCCGTTTTGGAGTGCAACCTGTCCAAAGATTTGCTCACGGGAGACCCACTCAGTTCAGTGATTGGAGTCAAATTAAGACCCAGGCTCCTTCCAGTTTCGGAAGTGGAGGCCCACGTTCTCCAAGAAATAGCTCGTTTGCCAATAGTATGAATTGGGGGCGCAGAGTTAATCCTACTGTCTCGAACATTCCGCCTACATCCTGTGCGAGAAAAGACTATGCGAGGATAGACTAG 2856 0.4359 MDGVSPDNEAEQSRCRGVGAASSSSASTGLGWRPSQLGFTPYTWAGETSDNSQALRVVVRKSLLARLTKEIIETYQICNPEFKYSEELNPKRYLTSPSVGVLNDGFDNVNSDLILTVNFVLVNFERNRRYLVKDVLGHGTFGQVAKCWVSDTSSYVAVKIIKNQPAYYQQALVEVSILNTLNKKYDPEDKHHIVRIYDYFLYQRHLCICFELLDTNLYELIKLNNFRGLSLSIVQLFSKQILHGLALLKDAGIIHCDLKPENILLCTSVKPAEVKIIDFGSACMEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLXPGASEFDLLRRMIEILGGQPPDYVLREAKNTGKFFKCIGNLQNGENSEIPSHGRSSYQALTEEEYEARELKKPSIGKEYFNHMNLEEIVTHYPYRKNLPEEDILRESQIRLALIDFLRGLVEFDPAKRWSPFQASRHPFVTGEPFTHPYEPPPETPRVAVVQAVKVDHHPGGGHWFAAGLSPNVPSKSRPSLYSSLHFQMVQYPPANSYGSVGSHGSYNDSVGLGSSYGSYGESSNMFAYCSPVGPSGIHLLGHGSTSMLGNSPDARRRVVPYQAGSARGISPSAGTFTHLPLGASPSQFTPPSSYTQVSASSPGHYGPTSPARGTSHGSPLGKTSTISQFNRRKNWGCSGSHQTQDITFSPHWQVQCPDSSIYGEGTAQFLSSSPSYLQSNIDAASRKQRGGGTNQKMACLFMPSSNSNLQPTELGHDNPESCLSLPDPGDWDPNYSDELLLQEDSSDGSCLATEFGRSMNIGSMEPLVGFGRFNHAFSTSSPISIQRQNGPVQAYSNFEMDSPPAHDVQAGYMRSMSKPCHLIPGILQNSPSRFGVQPVQRFAHGRPTQFSDWSQIKTQAPSSFGSGGPRSPRNSSFANSMNWGRRVNPTVSNIPPTSCARKDYARID 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2934 952 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 93 209 - -
Prci6g2934 952 Pfam Protein kinase domain 132 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2934 952 MobiDBLite consensus disorder prediction 896 933 - -
Prci6g2934 952 MobiDBLite consensus disorder prediction 1 29 - -
Prci6g2934 952 Gene3D Transferase(Phosphotransferase) domain 1 211 473 - -
Prci6g2934 952 MobiDBLite consensus disorder prediction 614 686 - -
Prci6g2934 952 ProSiteProfiles Protein kinase domain profile. 130 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2934 952 SUPERFAMILY Protein kinase-like (PK-like) 125 491 IPR011009 -
Prci6g2934 952 Gene3D Phosphorylase Kinase; domain 1 95 210 - -
Prci6g2934 952 CDD PKc_YAK1 130 472 - -
Prci6g2934 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Prci6g2934 952 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Prci6g2934 952 SMART serkin_6 130 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2934 952 PANTHER DUAL SPECIFICITY PROTEIN KINASE 59 475 - -
Prci6g2934 952 MobiDBLite consensus disorder prediction 749 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2934 Prci-Chr6 42628064 42663372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2934 129 374 MAP Kinase Gene Family AT3G18040 32.567 2.41e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Prci6g2934 Pkinase 3.8e-48 CL0016