Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2916 ATGAATAGTAGTAATGCAAGTGGTGGAGGTGGGACAGCTACGGGGATGATGGGGATCACTAGGTCACCGTTCACGCTCTCTCAGTGGCAGGAACTGGAGCACCAGGCGTTGATTTTCAAGTACTTGGTGGCGGGTCTTCCCGTGCCTCCCGATCTTGTCCTTCCCATTCAGAAGAGCTTCGAGTCCATTTCTCAAAGGTTCTTTCACCCTCCCACCATGAGTTATTGTTCCTTTTATGGGAAGAAGGTGGACCCGGAGCCAGGACGGTGCAGGAGGACTGATGGGAAAAAGTGGAGGTGCTCCAAGGAAGCATACCCAGACTCAAAATACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCTCATACCATGATACAGTCATCATCCACTGTGACATCACTGACTGTCACAGGTGGCAGTAGTAGAAATGAAAACTCCCAGAACCTTTCCACAAATGCCTTTACTAATCCCCAAGGTACTGGTTCTGGAACCTACCAGACTCAGTATAATCTGGATTCCATTCCCTATGGGATCCCAAGCAGAGAATACAGGTATCTTCGAGGGCTTAAATCTGAGGTTGGCGAGCATAGTTTTATTTCTGAAGCTTCGGGAAGTAACAGGTGTCTCCAGATGGAATCACCAATGGAAAACACATGGCCTTTGATGACAACCAGAGTTGCCTCAAATGCTACCTCAAAATCAAACAACAGCACTATGCAGCAGAGTGATTATCCTCAGCACTCATTTCTGTCCGGTGGGTATGCGTCTGGGGAGCCTGTGAAGCTGGGGGGTAGCCAGTCTCTTCGACCTTTATTTGATGAATGGCCTAGAAGCAGGGAATCATGGTCTGGACTGGAGGATGAGAGATCCAAGGAGGTAGCTTTTTCTACAACACAACTCTCAATATCAATCCCTATGTCCTCTTCCGACTTCTCTGCAGCTAGCTCTCAATCCCCAAATGATTAG 987 0.4873 MNSSNASGGGGTATGMMGITRSPFTLSQWQELEHQALIFKYLVAGLPVPPDLVLPIQKSFESISQRFFHPPTMSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESHTMIQSSSTVTSLTVTGGSSRNENSQNLSTNAFTNPQGTGSGTYQTQYNLDSIPYGIPSREYRYLRGLKSEVGEHSFISEASGSNRCLQMESPMENTWPLMTTRVASNATSKSNNSTMQQSDYPQHSFLSGGYASGEPVKLGGSQSLRPLFDEWPRSRESWSGLEDERSKEVAFSTTQLSISIPMSSSDFSAASSQSPND 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2916 328 ProSiteProfiles QLQ domain profile. 23 58 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci6g2916 328 Pfam WRC 85 127 IPR014977 -
Prci6g2916 328 SMART QLQ_2 22 58 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci6g2916 328 MobiDBLite consensus disorder prediction 235 258 - -
Prci6g2916 328 MobiDBLite consensus disorder prediction 286 306 - -
Prci6g2916 328 MobiDBLite consensus disorder prediction 286 300 - -
Prci6g2916 328 MobiDBLite consensus disorder prediction 116 175 - -
Prci6g2916 328 MobiDBLite consensus disorder prediction 235 256 - -
Prci6g2916 328 ProSiteProfiles WRC domain profile. 84 128 IPR014977 -
Prci6g2916 328 PANTHER GROWTH-REGULATING FACTOR 5 16 317 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci6g2916 328 Pfam QLQ 23 57 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci6g2916 328 MobiDBLite consensus disorder prediction 127 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2916 Prci-Chr6 42359580 42363641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2916 19 127 GRF Transcription Factor Family AT3G13960 60.177 2.76e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci6g2916 WRC 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2916 - - jre:109010217 479.559