Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2904 ATGGATGATCGTAGTCAATGGCATCTTTACGACCCACTTCTTCTCACAGACGCCTCTTTGCAACAAGAAAACTCTTCTATTCACTCCATTTACAATTCACAACCATCACTGAGCTCTCAAAGTCCCACAATGGCAGATACTGAATGGCAGGGCAGCTCCAATGACCAATTTTCTTGGAAAAGACGAGAGTTTGACAAAAAAGATGTGCAATTCGAAGACCCAATAGCGAAAAATATGGTTGATGGCAGATCACTGTTAGGATATTCTTTAACGACCCCTGATTTGGTCATCTGCGCTGGCTTACCAGATATTGCCATGGAATCCCCTGAAATGTCGGAAAGAAAATCTCGTCAAAAAGTGGAGTCGCCTATGGAGCTTTCTTTAGAGAATGGAATTAATGGGTCTGATGTTGAAAAGCCTCGGAAGATTCCAACCGTGAAATTCTCTATGCCGTGCGAAACCTTCAAAGAATTGTCTCCTGAAGCCTCTTTTGAGCTTTTCCCACCCCCTGAAGTCACCAATAAGTCGCCTCAAGACTTCCCTCCTAGAGAAAATGGATTTCTAGAAGATATGGAAGTGTCACAGGGGGCAGAATTGGATTCTCTAGATGATAGAGGAGATAACGAGGGAGAAGAGGATATTCGGAAGCTGAGAAGGGAGTTTGAGTGTCAGAAAAAGGAGCTGGCGGAAGCCAGGAGGATGTTGGAGGAACTCAAAAGGGAGAATCAACAGAAGAATAGAGAATGCCAAGAAGCATGGAAGTCTTTGCAAGATCTTCAGAATGAACTCATGCGCAAGTCCATGCATGTAGGATCATTGGCATTTGCCATTGAAGGGCAAGTAAAAGAAAAAAGTAGGTGGTTTTCCTCCCTGAGAGACTTGATGAGGAAAGTAAAGATTATGAAAATGGACCAAATCACACTTTCAGAGGAAGTAGAGACATATAAGAAGTATCTTGCAGATATGAGTGAAATGGGGACTACTATCAAGTCCAAGATACATGAGCAGCTAGAGTTCCACGAAGATCTCAGGTCTAAATATCTAGAAGGCTCGAAGAAACAAAAAGAACTTTACAATAAGGTTTTGGAGTTGAAAGGCAAGATTAGGGTCTTTTGCCGGTGTAGGCCTCTTAATGCTGAAGAGATGACAGACGAGGCAAGAATGGTAATAGATTTCGAAGCAGCAAAAGATGGTGAGCTTACTGTACTGTCAAATGGGGCTCCTAGAAAGACTTTCAAGTTTGATGCTGTTTTTGGGCCCCAAGCAGATCAAGCCGACATATTTGAAGACACAGCACCATTTGCAACCTCAGTTCTAGATGGGTATAATGTATGCATCTTTGCTTACGGGCAGACTGGAACAGGAAAAACATTTACAATGGAAGGTACAAAAGAGGCACGTGGAGTTAATTTCAGGACTCTTGAGAAAATGTTTGACATAATCAACGAGAGACACAAGCTATATCGCTATGATGTCTCTGTAAGTGTGTTAGAAGTCTACAATGAGCAAATAAGAGACTTGCTTGTCTCAGGAAATCAGCTTGGAGTAGCTGCAAGAAGGCTTGAAATAAGGCAAGCAGGCGAAGGAATGCACCACGTTCCAGGATTGGTAGAGGCACACGTGAAGAATATGACTGAAGTCTGGGAAGTCCTACAAACTGGCAGCAACGCAAGGGCTGTTAGCTCAACCAATGCCAATGAGCACAGCAGCCGATCCCACTGCATTCACTGTGTTATGGTTAAGGGGGAGAATTTGTTGAATGGGGAATGCACAAGAAGCAAGTTGTGGCTAGTAGACCTGGCAGGCAGCGAGCGAGTGGCTAAAACAGAAGTGCAAGGGGAACGACTCAAGGAAACTCAGAATATTAACAGGTCACTGTCTGCACTAGGAGATGTTATATCAGCCCTTGCAACAAAGTGCTCACATGTTCCTTTCAGAAATTCCAAACTTACACACTTGCTGCAAGACTCCTTAGGAGGAGATTCGAAGACGCTCATGTTTGTACAGATTAGTCCTACCGAAAATGATTTAAGTGAGACAATTTGCTCTCTGAACTTTGCTAGTAGAGTGAGGGGAATAGAATTAGGGCCCGCAAAAAGGCAATTGGACCATACTGAACTTGTCAAATTCAAACAACTGGCTGAGAAAACCAAGCAAGAGATGAAGATTAAGGATTTGCAAATCAAGAAAATGGAGGAAACAATTCATGGATTAGATTCAAAGATAAAGGAGAGGGATATTAAAACCAAAAGTCTACAAGACAAGGTCAAGGAGTTGGAAGCACAACTTTTGATTGAGAGAAAGCTAGCCCGCCAACATGTAGACTCAAAGATAGCTGAGCAGCATCTGCTTAAACATCAAGAACAAACAAATACACCTATGAGATCAGCACTTGCAAATAAACCACCAGGAACTCACAAGAACTTTAACGATCTAATGGGTTTAACCAGACCACTTACGGAGAACAATAGCTTAAAACAACCCTCAATGCCCTTTACAACGTTGGATAACTCTGTCAAGTGCATTGATCACGCTGAAAAAGAGAACAATCCTGATATAGTTGATAAATTTGTATTGCCTAAAAGAACTGGAAGAGCTTCTATCTGCACAATGACTCCACGTATTCCTTTAGTTCCTACTTTAAGGCGAAACTCTCTGATACCCCTCCCAAGTGTGCCTAGCTTGCCTCACCTCACATCACCAATAGTGCCAGTGTTAGAAAGTAGAGCTGAGGAGAAAGAAAGCAATGGCGAAGCGGGAAACTGTTTGGCTGCACAGACACATCTTGAGAGTCCTAAACAAAGAATGAAAAGTGGAAGTAAGAAGAGAGGAAGCATGCTAAGGCGAAGCTTATACAAGAAGATTCAGACCAAGTCGCCAATCCAGCAGCATATGAGAAGGGTTGGTGTAAATGTAGGCATGGAGAAAGTAAGAGTGTCCATTGGGAGTCAAGGGAGGATGATGGCAAAGAGGGGATTGCAGAAAAATGGTAGAAGAAATGGGACAGAAGAAACTCAGCAAAAGAATAGTCAAAAAGAAAAGGAAAGGGGGTGGAATGCAGGAACAACAGTCAAACCGAGTTTTTGA 3087 0.4273 MDDRSQWHLYDPLLLTDASLQQENSSIHSIYNSQPSLSSQSPTMADTEWQGSSNDQFSWKRREFDKKDVQFEDPIAKNMVDGRSLLGYSLTTPDLVICAGLPDIAMESPEMSERKSRQKVESPMELSLENGINGSDVEKPRKIPTVKFSMPCETFKELSPEASFELFPPPEVTNKSPQDFPPRENGFLEDMEVSQGAELDSLDDRGDNEGEEDIRKLRREFECQKKELAEARRMLEELKRENQQKNRECQEAWKSLQDLQNELMRKSMHVGSLAFAIEGQVKEKSRWFSSLRDLMRKVKIMKMDQITLSEEVETYKKYLADMSEMGTTIKSKIHEQLEFHEDLRSKYLEGSKKQKELYNKVLELKGKIRVFCRCRPLNAEEMTDEARMVIDFEAAKDGELTVLSNGAPRKTFKFDAVFGPQADQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTKEARGVNFRTLEKMFDIINERHKLYRYDVSVSVLEVYNEQIRDLLVSGNQLGVAARRLEIRQAGEGMHHVPGLVEAHVKNMTEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVQGERLKETQNINRSLSALGDVISALATKCSHVPFRNSKLTHLLQDSLGGDSKTLMFVQISPTENDLSETICSLNFASRVRGIELGPAKRQLDHTELVKFKQLAEKTKQEMKIKDLQIKKMEETIHGLDSKIKERDIKTKSLQDKVKELEAQLLIERKLARQHVDSKIAEQHLLKHQEQTNTPMRSALANKPPGTHKNFNDLMGLTRPLTENNSLKQPSMPFTTLDNSVKCIDHAEKENNPDIVDKFVLPKRTGRASICTMTPRIPLVPTLRRNSLIPLPSVPSLPHLTSPIVPVLESRAEEKESNGEAGNCLAAQTHLESPKQRMKSGSKKRGSMLRRSLYKKIQTKSPIQQHMRRVGVNVGMEKVRVSIGSQGRMMAKRGLQKNGRRNGTEETQQKNSQKEKERGWNAGTTVKPSF 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2904 1028 CDD KISc_C_terminal 365 695 - -
Prci6g2904 1028 SMART kinesin_4 365 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci6g2904 1028 FunFam kinesin-like protein KIN-14R 312 695 - -
Prci6g2904 1028 PANTHER KINESIN-LIKE PROTEIN KLP-3 76 907 IPR027640 GO:0003777|GO:0007018
Prci6g2904 1028 PRINTS Kinesin heavy chain signature 563 580 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci6g2904 1028 PRINTS Kinesin heavy chain signature 441 462 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci6g2904 1028 PRINTS Kinesin heavy chain signature 643 664 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci6g2904 1028 PRINTS Kinesin heavy chain signature 594 612 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci6g2904 1028 MobiDBLite consensus disorder prediction 988 1028 - -
Prci6g2904 1028 ProSitePatterns Kinesin motor domain signature. 593 604 IPR019821 GO:0003777|GO:0005524|GO:0007018
Prci6g2904 1028 MobiDBLite consensus disorder prediction 996 1019 - -
Prci6g2904 1028 MobiDBLite consensus disorder prediction 31 53 - -
Prci6g2904 1028 Gene3D Kinesin motor domain 362 736 IPR036961 -
Prci6g2904 1028 MobiDBLite consensus disorder prediction 108 138 - -
Prci6g2904 1028 Coils Coil 214 262 - -
Prci6g2904 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 731 IPR027417 -
Prci6g2904 1028 ProSiteProfiles Kinesin motor domain profile. 367 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci6g2904 1028 Coils Coil 714 734 - -
Prci6g2904 1028 Pfam Kinesin motor domain 373 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci6g2904 1028 Coils Coil 742 762 - -
Prci6g2904 1028 MobiDBLite consensus disorder prediction 108 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2904 Prci-Chr6 41983804 41988945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2904 347 720 Calmodulin-binding Proteins AT5G65930 44.063 1.82e-82 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2904 K10406 - gmx:100817247 1409.05