Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2895 ATGAGCAATATCAGCATGGTGGAGGCCAAGTTGCCCCCAGGTTTCAGGTTCCATCCCAGAGACGAAGAACTTGTGTGCGATTACTTGATGAAGAAAGTCACTCACTGTGATGATTCCGATTCCACTCTCATGATTGACGTTGACCTTAACAAGTGTGAGCCTTGGGATATTCCAGAAACGGCATGTGTGGGAGGGAAGGAGTGGTACTTCTACACGCAGAGAGACAGAAAGTATGCGACGGGGCAGAGAACAAATAGAGCGACGGCGTCGGGGTATTGGAAGGCCACCGGCAAGGACAGGGCCGTCCTAAGAAAGGCCAAAGTGGTTGGCATGAGAAAGACTTTGGTGTTCTATCAAGGAAGGGCTCCCAAAGGCAAAAAGACTGACTGGGTCATGCACGAGTTTCGCCTTCATCCTCCTCCTTCCCATCATTTCCCCAAGGAAGACTGGGTGCTGTGTAGGGTATTCTACAAGAACAGAGAAGAAGAAAATGGAAAAGCTGGCATGGGAAGCTGCTATGACGACGCTGGCTCTTCATCGCTCCCTGAATTAATGGATTCTTACATCAGTTTTGATCAGCCTTCTGCAGCTCATCACCACCATAATCAATATCATCAGCAAGTGCCCTGCTTCTCCAACATCAATAATCATACTTTCCCTCTTCAACCAAACCCTAACCCTAGCAGTCACCCCACCACCGTTCTCCACCATCACCACCAACCACCAAATGGAGCAGCAGCAACAGTAAGTACTCCTCCAAATAACTTGGATTCCTTAGACCCTTTTTCTCACGACTCCAAGGTACTCAAAGCTTTGTTGACTCAACTCACCAAGATGGAAACTCATGAAGGATCTCCCACCAGCTTTGAAGCTCACGCACCATCTCAGACTCACTTTCCTCAAACGGCTATTCCCAGTTATTTATGGAACAGTCATTAG 939 0.4814 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHCDDSDSTLMIDVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATGQRTNRATASGYWKATGKDRAVLRKAKVVGMRKTLVFYQGRAPKGKKTDWVMHEFRLHPPPSHHFPKEDWVLCRVFYKNREEENGKAGMGSCYDDAGSSSLPELMDSYISFDQPSAAHHHHNQYHQQVPCFSNINNHTFPLQPNPNPSSHPTTVLHHHHQPPNGAAATVSTPPNNLDSLDPFSHDSKVLKALLTQLTKMETHEGSPTSFEAHAPSQTHFPQTAIPSYLWNSH 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2895 312 MobiDBLite consensus disorder prediction 220 236 - -
Prci6g2895 312 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
Prci6g2895 312 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 229 - -
Prci6g2895 312 MobiDBLite consensus disorder prediction 220 249 - -
Prci6g2895 312 FunFam NAC domain-containing protein 100-like 20 162 - -
Prci6g2895 312 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Prci6g2895 312 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Prci6g2895 312 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2895 Prci-Chr6 41938581 41942349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2895 2 310 NAC Transcription Factor Family AT1G56010 55.799 3.25e-119 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci6g2895 NAM 5.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2895 - - ahf:112703413 383.645