Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2868 ATGCCTCTGTCTCCTTCCATGGCTGCTTTTCCTCAATTCTATTCAAACTACTCAATATTCCCCGATTTCACGGAGTTTCAAACCCAAGGTTCTTCCATTAATGGCAATAACGTTAATAACTTCTCAGTTATAGAGAACAGAATGTGTGGTGTCCACGATAGCTTCAACCATATTCCCAGTGGTGCACTGATCGATCATGTTTCTTCAGTATTGGATTGTGATACTATGGCTTCGTCTTGGTTTCCTACGTTTTCCGATCAGGTGGGGGGGAGCTTACCTGAGTTGGCCATTCCAGTGATTTACGGCACCGTCGACGGTGGTTTTCAGGGTCTGAACGGCGGCGGATACCAACCACCACATCATCTGGGCGATTTCGTTGAAGAATGTTGTGGGTTTGTGGAGGATATTAAGCCACCTTCTTATCCTAATTCTGCCACTGAGAAGTGGGGATCATATCAAGGAAATCAAATGGCAGCAGTTGAGGAACCAAACATGAAGGTAGGACGATACTCAGAAGAAGAAAGGAAGGAAAGAATTCTGCGATATTTGAAGAAAAGAAACCAAAGAAACTTCAACAAAACGATCAAGTATGCATGTCGGAAAACTCTAGCTGATCGGAGAGTCAGAGTTAGAGGAAGGTTTGCCAGAAACAACGACCTCTGTGAGGATGAAATCTCCATGAAGAAGAATGAGAATATTACTCACAAACAGGACCTGTACGGTGGTGATGATTCCATCCAATTTCAGATAAGGAACGATGAGGAGGAGGAAGATTGGCTGCAAGAGGCAATGGCGAGTTTGGTGTATTTGTCTCATTCTTCGCCTGACGATATGTAG 837 0.4409 MPLSPSMAAFPQFYSNYSIFPDFTEFQTQGSSINGNNVNNFSVIENRMCGVHDSFNHIPSGALIDHVSSVLDCDTMASSWFPTFSDQVGGSLPELAIPVIYGTVDGGFQGLNGGGYQPPHHLGDFVEECCGFVEDIKPPSYPNSATEKWGSYQGNQMAAVEEPNMKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNDLCEDEISMKKNENITHKQDLYGGDDSIQFQIRNDEEEEDWLQEAMASLVYLSHSSPDDM 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2868 278 Pfam CCT motif 175 217 IPR010402 GO:0005515
Prci6g2868 278 ProSiteProfiles CCT domain profile. 175 217 IPR010402 GO:0005515
Prci6g2868 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 126 237 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2868 Prci-Chr6 41615489 41617047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2868 131 222 C2C2-CO-like Transcription Factor Family AT5G24930 38.043 5.85e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci6g2868 CCT 8.6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2868 - - gmx:102670442 311.612