Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2860 ATGGCTGGCTTTTTGCCGGGTGATGTCACTTGTAATGGAACACATGGTTTCCAAAGACACCCTGAGATGTCAGTGCATGGCCCTGGTTGGTATTTTACTAGGAAGGAGATTGAAGAAAATTCACCATCCAAACGAGATGGCGTAGATTGGAAGAAAGAGATGTACTTTCGTAAATCATACTGCACGTTCCTACAAGATTTAGGCATGAGACTTAAATTGCCTCAGGTAACCATTGCTACAGCAATAATTTTTTGTCATCGATTCTTCCTTCGTCATTCTCTTGCAAGGAATGATAGGAAGACCATTGCAACAGCGTGCATGTTTCTTGCTGGGAAAGTCGAAGAAACTCCTCGCCCTTTGAAAGATGTAACTCTTGTCTCGTATGAAATTACAAACAAGAAGGACCATGAAGCAGCTCAAAGAATCAAACAAAAGGAGGTATACGAACAGCAGAAAGACTTGATCTTAGCTGGAGAGAGGATTGTCCTTCAAACTCTAGGTTTTGATTTTAATCTGCTCCATCCTTATAAACCTCTTGTTGAGGCTATTAAGAAATTTAAAGTTGCTCAAAATGCCCTTGCTCAAGTTGCGTGGAATTTTGTTAATGATGGACTTCGGACATGTCTTTGCCTGCAATTCCAGCCCCATCATATTGCAGCAGGAGCTATTTTCCTTGCTGCCAAGTTCCTTAAGGTGAAGCTCCCATCAGATGGGGAGAGGGTCTGGTGGCAAGAATTTGATGTTACCCCTCGGCAATTGGAGGAAGTTAGCAACCAAATGTTGGAGCTATATGAACAAAACCGAGTGCCACCTTCGAATGACATTGAAGGTGCTACAGGAAGTGGGACTGCTAATCGGGCTGCTGCTAAGGTTCCTGCTAGCAATGACGAAAATGCAGCCACAAACAATAATTCTCATACTGGAGCTACGAGTTTAAAACTTGAAACCTCAAAACCTGGAGCTTCTAAGACAGTGTTTGGGTCATCTGGTAATCATGTGGGGCTTCCAGTGTCAAACCATGGTAGAAGTACTGATTATGGTGGCAGAGAAATGAAACACAGGGCAGATGAATCCAGCGGTAATCATCATCTTGAGTGTGAAACCCTGCCACACAAGGAAAACTTACAGGAAGCTCAACACAAGTCGAGATCTCAATCAGGTAACGGGGAAGAGCAAGAAAGCAGTGTTGAGAGAAGTGAGATGAAGGAGGCTGCTGAGTTGAATGCTAAACATGCCAACAGAGATCCTGATCACAGGGATAGTACATTTGGGCAGCCACCTCAAGAAGCTATTAAAAAAATTGACAGAGACAGGGTAAAGGCAGCACTAGAGAAACGAAGGAAAACATCTGGTCATATAACTAAGAAAACAGAGGTTATGGATGATGACGATCTCATTGAGAGGGAACTGGAGGATGGAATTGAATTGGCTGCTCAGAGTGAAAAGAACAAGCAGGATAGGAGTCAGATCTGGTCTAAACCCTCAGATAGATCGAATAATGGGAATTTGCTGCTTGGAAGGCACCAAGATCATGCAGATGAGCATCTTCAGGGAGTAAAGAGCTTGGCATCATCTGAACCTGATCTAAGTACCATTGAAGAAGGGGAGGTATCAGCACTTGATGACATTGGTTCTGGACTTCAATCACCCAAGTCAGGCAACCGCAAGAGAAAAGCTGGAAGCTCACCTGACAGGGAATTGGAAGGAAGACCTCATAGCCCTTATTATTCCTTTGATTATGCGGAAGATCGAAACAAGGTCAGCCAGCTCAGTCATTCTGAGGGGGACAATTAA 1794 0.4376 MAGFLPGDVTCNGTHGFQRHPEMSVHGPGWYFTRKEIEENSPSKRDGVDWKKEMYFRKSYCTFLQDLGMRLKLPQVTIATAIIFCHRFFLRHSLARNDRKTIATACMFLAGKVEETPRPLKDVTLVSYEITNKKDHEAAQRIKQKEVYEQQKDLILAGERIVLQTLGFDFNLLHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTCLCLQFQPHHIAAGAIFLAAKFLKVKLPSDGERVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSNDIEGATGSGTANRAAAKVPASNDENAATNNNSHTGATSLKLETSKPGASKTVFGSSGNHVGLPVSNHGRSTDYGGREMKHRADESSGNHHLECETLPHKENLQEAQHKSRSQSGNGEEQESSVERSEMKEAAELNAKHANRDPDHRDSTFGQPPQEAIKKIDRDRVKAALEKRRKTSGHITKKTEVMDDDDLIERELEDGIELAAQSEKNKQDRSQIWSKPSDRSNNGNLLLGRHQDHADEHLQGVKSLASSEPDLSTIEEGEVSALDDIGSGLQSPKSGNRKRKAGSSPDRELEGRPHSPYYSFDYAEDRNKVSQLSHSEGDN 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2860 597 CDD CYCLIN_AcCycT_rpt1 46 169 - -
Prci6g2860 597 FunFam Cyclin-T1-5 like 172 276 - -
Prci6g2860 597 Gene3D - 21 170 - -
Prci6g2860 597 PANTHER CYCLIN 30 354 IPR043198 GO:0006357|GO:0016538
Prci6g2860 597 MobiDBLite consensus disorder prediction 265 362 - -
Prci6g2860 597 SMART cyclin_7 177 262 IPR013763 -
Prci6g2860 597 SMART cyclin_7 62 164 IPR013763 -
Prci6g2860 597 MobiDBLite consensus disorder prediction 430 463 - -
Prci6g2860 597 MobiDBLite consensus disorder prediction 345 362 - -
Prci6g2860 597 FunFam Cyclin-T1-5 like 20 170 - -
Prci6g2860 597 Gene3D - 173 274 - -
Prci6g2860 597 MobiDBLite consensus disorder prediction 557 572 - -
Prci6g2860 597 Pfam Cyclin, N-terminal domain 33 170 IPR006671 -
Prci6g2860 597 MobiDBLite consensus disorder prediction 471 491 - -
Prci6g2860 597 MobiDBLite consensus disorder prediction 295 338 - -
Prci6g2860 597 SUPERFAMILY Cyclin-like 174 269 IPR036915 -
Prci6g2860 597 MobiDBLite consensus disorder prediction 265 280 - -
Prci6g2860 597 SUPERFAMILY Cyclin-like 26 171 IPR036915 -
Prci6g2860 597 MobiDBLite consensus disorder prediction 374 422 - -
Prci6g2860 597 CDD CYCLIN_AcCycT_rpt2 174 265 - -
Prci6g2860 597 MobiDBLite consensus disorder prediction 374 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2860 Prci-Chr6 41589668 41598977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2860 52 179 Core Cell Cycle Gene Families AT5G27620 26.562 9.75e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2860 K15188 - gmx:100791516 803.897