Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2845 ATGAAGCAGTTGATTCGCCGGCTCGCGCGGGTCGCTGATTCGTCTCAGTACACTCTGCTCCGATCCGGCTCGTGCAACCGGCGGCCGCGACTGTCCCAGTCATTCCGATTGGTGGCATCTTCCAAGCTCCGGCGGTCGCACACGGTGCCGGAAGGTCACGTGCCGGTCTACGTAGGTGATGAGATGGAAAGATTCGTGGTCAGCGCGGAGCTTCTGAACCACCCGATCTTCGTGAAGCTTCTGAACAAATCGGCTCAGGAGTACGGCTACGAGCAGCAAGGCGTCCTCCGTATCCCCTGTCATGTCTTCGTCTTCGAGCGCGTCCTCGAAGCTCTCCGTCTCGGTCTGGGCCACGACGACGACGACGCGCGTGACATCCACGACCTCCTCAGTTCTCCTTCCTCCGAAGACTTTTGCTAG 420 0.6 MKQLIRRLARVADSSQYTLLRSGSCNRRPRLSQSFRLVASSKLRRSHTVPEGHVPVYVGDEMERFVVSAELLNHPIFVKLLNKSAQEYGYEQQGVLRIPCHVFVFERVLEALRLGLGHDDDDARDIHDLLSSPSSEDFC 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2845 139 Pfam Auxin responsive protein 14 112 IPR003676 GO:0009733
Prci6g2845 139 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2845 Prci-Chr6 41264695 41265465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2845 47 123 Calmodulin-binding Proteins AT5G20810 40.506 9.07e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2845 K14488 - cave:132175866 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g2845 6 41264695 41265465 Prci6g2845 6 41264695 41265465 ECH