Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2821 ATGGCTTCTTCAATACAGTCTGTTTCTACGGATGAGCCGGTTGTTACTGTGGATTGGCTTTATGCTAACCTTAAGGACCCTAATTTGAAGGTGCTGGATGCATCCTGGTACATGCCAGATGAGCAGAGGAACCCCATTCAAGAATATCAGGCTGCTCACATTCCTGGGGCCCTTTTATTTGACATAGACAGAATAGCAGATCAAACTACAGATTTACCGCATATGTTGCCATCAGAGGAAGCTTTTGCTGCTGCTGCATCTGCTCTTAACATAGAAAACAAAGACAGAGTGGTTGTTTATGATGGCAAAGGAATATTTAGTGCAGCTCGAGTCTGGTGGATGTTCCAAGTGTTTGGGCATGACAAAGTTTGGGTATTAGATGGTGGGCTGCCAAGATGGCGTGCTTTAGGATATGACATTGAAACTACTGCTCCTTGTGATGCTATATTAAAATCCAGTACTGCTACCCTGGCAGTAGAGAAAGTATATCAGGGACAGTCTGTTGGCCCAATCACATTTCAAACTAAATTTCAGCCACATCTTGTTTGGTCCCTGGAACAGGTCAAGAGAAACATTGAGGAAAAAAGCTACCAGCACATAGATGCAAGATCAAAGCCTAGGTTTGATGGGGTGGCTCCAGAACCCCGAAAGGGGATCCAAAGCGGTCATGTACCCGGAAGCAAGTGCATTCCTTTTTTCCAGCTGTTGGATGCTTCACAGTCATTGTTACCCGCAGATGAAATTAAGAAGCGACTTGATGAAGAAGGCATCTCATTGGACGGCCCCATCATGACTTCATGCGGCACTGGCGTAACTGCTTGCATTCTTGTGGCCTCCATCGTCTTGGGAAATCTGACATTGCAGTCTATGATGGATCTTGGACTGAATGGGCATTACAATCTGACACAGTCAAAGAAACTTCATGATTGCAATATCACAATTCAAATACATGAAAAAAGAGGGGAAAATAAGATGAACAACAACAGCAAGAGAAACATGGGACAGATGAAACAGAAAGAGGTAGGTCCTATAGTCACTGTTCTTTCTTAA 1050 0.4381 MASSIQSVSTDEPVVTVDWLYANLKDPNLKVLDASWYMPDEQRNPIQEYQAAHIPGALLFDIDRIADQTTDLPHMLPSEEAFAAAASALNIENKDRVVVYDGKGIFSAARVWWMFQVFGHDKVWVLDGGLPRWRALGYDIETTAPCDAILKSSTATLAVEKVYQGQSVGPITFQTKFQPHLVWSLEQVKRNIEEKSYQHIDARSKPRFDGVAPEPRKGIQSGHVPGSKCIPFFQLLDASQSLLPADEIKKRLDEEGISLDGPIMTSCGTGVTACILVASIVLGNLTLQSMMDLGLNGHYNLTQSKKLHDCNITIQIHEKRGENKMNNNSKRNMGQMKQKEVGPIVTVLS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2821 349 FunFam Sulfurtransferase 7 149 - -
Prci6g2821 349 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 145 IPR036873 -
Prci6g2821 349 Gene3D - 7 148 IPR036873 -
Prci6g2821 349 FunFam Sulfurtransferase 178 292 - -
Prci6g2821 349 ProSiteProfiles Rhodanese domain profile. 193 278 IPR001763 -
Prci6g2821 349 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 178 279 IPR036873 -
Prci6g2821 349 ProSiteProfiles Rhodanese domain profile. 25 142 IPR001763 -
Prci6g2821 349 Gene3D - 178 297 IPR036873 -
Prci6g2821 349 SMART rhod_4 15 139 IPR001763 -
Prci6g2821 349 SMART rhod_4 183 304 IPR001763 -
Prci6g2821 349 CDD TST_Repeat_2 184 278 - -
Prci6g2821 349 PANTHER THIOSULFATE SULFERTANSFERASE 11 281 IPR045078 GO:0016783
Prci6g2821 349 Pfam Rhodanese-like domain 16 135 IPR001763 -
Prci6g2821 349 Pfam Rhodanese-like domain 185 281 IPR001763 -
Prci6g2821 349 CDD TST_Repeat_1 14 135 - -
Prci6g2821 349 ProSitePatterns Rhodanese signature 1. 49 60 IPR001307 GO:0004792
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2821 Prci-Chr6 41093945 41101624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2821 4 280 Sulfurtransferasese or Rhodanese AT1G79230 75.090 3.38e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2821 K01011 - aew:130751339 461.07