Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2806 ATGTTCTTTCATCAGACTGGTGAGGAATTCGCTCTTGAGTTCATGCGAGATAGGGTGAATCTCAAGAAGCCTGGATTTCCAAATGCTGGTGATCCCAATTGCACATCAGGTTACATAAAACTGAAAGACATTCTAGGTGTCAGTCATGCAGGATCTGAAAGTGGATCAGAGATTTCTATGCTTTCAATGGTTGAAAAGGGTCCAAAAGAGTATGATAAAAAGAACTTGTCATTACATGAAGACAGAAGCAATTATGGGTCAGTTCGATCATTACCAAGAACCTCATTCAATCAAGACAAAAATCAATTTGTGCATGGTTATACCTCTTTGGGAGGCTCTGATCTATCAAACACAATGAAAGTTCTTTGCAGCTTTGGTGGTAGAATATTACCTCGGCCAAGTGATGGAAAGCTAAGGTATGTTGGAGGTGAAACACGCATGATCCGTTTAAGAAAAGACATATCTTGGCAGGATCTGATGCATAAAACATTATCAATCTATAATCAAACTCATATACTTAAGTATCAGCTTCCTGGGGAAGAGCTTGATGCTTTGGTATCAGTGTCATCTGATGAGGATTTGCAGAATATGATGGAAGAATGTAACCATCTGGATGATAGAGAAGGATTGCGAAATCTTAGGATGTTTTTGTTTTCAATTAATGATTTAGAGGATGCTCAGGTTGGTCTCAATGTCACGAATGATGATTCTGAGATCCAATTTGTCATTGCTGTCAATGGCATGGACTTAGATCCAAGAAACAACTCAACCCATCTTAGTGTGAGCTCTTTAGCAAATAATTTACACGAATTGGACGGGCACAATGTTGAAAGGGAGACTAGTAGAATTGCTGTAGAAACTGGAGGTTTCAACAAAGCTCACTTGACCAGTAAAATTAGTTCATCATTAACCATGCAGTCTTCCCAGCCAATACCACCAACTTCATCAAATGCTTATGAAACCTATCCACATTTCTATATTGATCAGATGGCACGTCTTGGGGAAATCGTTAGTCAGTATCCAATTCACCAAGACCTTAATGTTTCCCAGAACTCTGCTGATCCTACTACTATTCCTCCTCATGGGATGATTAATCTACCTGGAGCTTTAAATGAGGGCTATTTACCTAGTGGATTACCAGTACAGAATTCCAAAATACTGACAATGCAGGTGACTAATTTGGGTGATAGCTCAGTTCAACAAGGAAGTGACCCTGAGAAAGTTTTAGCCATGCAAACACCACCTGTTGCCCCCTCTCAACCATTTGATGGGTACTTGAAAAATAATTTTCCTGAGGATACAGTAGCTGTTACTTTACAAGAGGGGCATATGCCTTCATCACCTTCAGCAAAAAAAGACCAGCACCAGGATAATCAAGAAGCCTCTTCTACATCTGGCAGTGCACTTGCTCCTGCTTACGCTGATTCCCAGTCCAAACCATATGATCTGAGTGGTCTTCAACCTCCTCCACTTCCAAAGAGAGTTTACTATTCAGAAAGAACTCCCAGAGAGCAAGCTGAGACACTGAATCGCTCCTCAAAGTCAGATGATACTGAGGGCTCTCAGTTTCTTGTGTCAGATTTACTTTCTGATATCAAGCCGCAGGGTTCAGTTGCAGAATCTGGTGACAACATGCATAATAGAAATCTTACCAATCGTTCTGAGGAATTGAACATTGCAGCAAAGCCATTGCATGCAGATGGCCACGCTATTTATAATGGATTTTCCAGACCGCCAATGCATGTGCCTGATGAGAGCAGTCAGACAAAATTTAAGCTATCAGAACATGTAAATCCTGAATTGAGGCAGGCCTTGCCAGACAATAAGGCAAGTAAGGATGAGATAAATGAGGATCAGTTTAATAAGTTGGAAGCTGAAAGTCATTTTAAAGATAACCCGGAGAAGCCTCTGCTTGATGAAAACAAAAACAGTACTTTGCAGCAGCTTCCTTCCGTTAATCATTATGATGATCCAGCATCCGAACTTCCAGAGATCAATTGGAATGACACCTTTAGGAAGGAGTCCAATGATGATTGTGTGACACAAGCACTACCTGTTTCTTCTACTGAGCACCCAGTTGATGATGTTTCTCAAGATTTTCCCTCTAATGTTTTTTCCAAGCAAGCACAAGGTGTTCTTATTAATATTGATGATCGATTTCCCCGTGAATTGCTTTCTAATATGTACTCTCAAGCAACACTTGCAGAAGATTCATCCAGTCTACTTCCGCTAACCAAGGATGGAGTTAGTGTAAGCATAGCCATGGAAAATCATGAACCTAAACCATGGTCATATTTTCATAAATTGGCACAAGGGCTTGATAATGTGACCTTGATTGACCGGGACCATCATGATTTCTCACCTGCACTAGGAAATGAAGCCGGGGATAATAAAATTCCCCTGATTACACCGGTAATGACTGATGGAATATCTCTAGATCATGTAGAATCCCGCCCCAACTTTGGTGAAGAAAATCAGAAAGACTGGGAGGGAATGATTGGAACTGAAACTGCTGAATCAAATTATGGTCATAATCATTCCCAAATGAAGGAAACTGAAAGCATGCAGTTTGATGCTATGATGGGAAACGTAAGAGCACAAGAATCAGAATATGAGGATGTCAATTTTGGAAAAAGAAACAGTAGTCTACCACCTCTGGATCATTCTATAGGAGATGTTGATATCAATACCTTTCAGTTCATAAAGAATGAAGATCTTGAAGAGTTGAAGGAACTGGGTTCTGGTACCTTTGGGACTGTTTATCATGGAAAATGGCGGGGGACCGATGTTGCCATTAAAAGAATCAAGAAAAGCTGCTTCACTGGTCGATCATCTGAACAAGAAAGACTGACTCTAGAGTTCTGGCGCGAAGCTGACATACTTTCCAAACTTCATCATCCAAATGTGGTGGCATTTTATGGTGTGGTTCAGGATGGACCTGGTGGAACAATGGCCACTGTTACTGAATTCATGGTGGATGGTTCGCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTAGGAAGAGGCTGATAATTGCCATGGATGCTGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACATGAAAGATCCTTTACGGCCAATCTGCAAGGTTGGAGATTTTGGGTTGTCAAAAATCAAAAGAAATACCCTGGTATCCGGTGGTGTGCGAGGAACCTTGCCATGGATGGCGCCAGAGCTGCTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTTGATGTATTCTCCTTTGGCATAGTATTATGGGAGATTCTAACGGGTGAGGAGCCGTATGCCAATATGCACTATGGTGCAATTATAGGTGGGATAGTAAATAACACATTAAGGCCAACAATCCCAAGTAATTGTGATTTGGAATGGAGAACACTAATGGAGCAATGTTGGGCGCCGAATCCTGCAGCCCGGCCGTCCTTCTCCGAAATCACTAGTCGCTTGCGTGTAATGTCAGCAGCAGCGAGTCAATCCAAAGCACAAGGCCACAAAGCAGCTAAATGA 3567 0.4132 MFFHQTGEEFALEFMRDRVNLKKPGFPNAGDPNCTSGYIKLKDILGVSHAGSESGSEISMLSMVEKGPKEYDKKNLSLHEDRSNYGSVRSLPRTSFNQDKNQFVHGYTSLGGSDLSNTMKVLCSFGGRILPRPSDGKLRYVGGETRMIRLRKDISWQDLMHKTLSIYNQTHILKYQLPGEELDALVSVSSDEDLQNMMEECNHLDDREGLRNLRMFLFSINDLEDAQVGLNVTNDDSEIQFVIAVNGMDLDPRNNSTHLSVSSLANNLHELDGHNVERETSRIAVETGGFNKAHLTSKISSSLTMQSSQPIPPTSSNAYETYPHFYIDQMARLGEIVSQYPIHQDLNVSQNSADPTTIPPHGMINLPGALNEGYLPSGLPVQNSKILTMQVTNLGDSSVQQGSDPEKVLAMQTPPVAPSQPFDGYLKNNFPEDTVAVTLQEGHMPSSPSAKKDQHQDNQEASSTSGSALAPAYADSQSKPYDLSGLQPPPLPKRVYYSERTPREQAETLNRSSKSDDTEGSQFLVSDLLSDIKPQGSVAESGDNMHNRNLTNRSEELNIAAKPLHADGHAIYNGFSRPPMHVPDESSQTKFKLSEHVNPELRQALPDNKASKDEINEDQFNKLEAESHFKDNPEKPLLDENKNSTLQQLPSVNHYDDPASELPEINWNDTFRKESNDDCVTQALPVSSTEHPVDDVSQDFPSNVFSKQAQGVLINIDDRFPRELLSNMYSQATLAEDSSSLLPLTKDGVSVSIAMENHEPKPWSYFHKLAQGLDNVTLIDRDHHDFSPALGNEAGDNKIPLITPVMTDGISLDHVESRPNFGEENQKDWEGMIGTETAESNYGHNHSQMKETESMQFDAMMGNVRAQESEYEDVNFGKRNSSLPPLDHSIGDVDINTFQFIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNMKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSNCDLEWRTLMEQCWAPNPAARPSFSEITSRLRVMSAAASQSKAQGHKAAK 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2806 1188 MobiDBLite consensus disorder prediction 497 514 - -
Prci6g2806 1188 SUPERFAMILY CAD & PB1 domains 134 223 - -
Prci6g2806 1188 SMART PB1_new 133 220 IPR000270 GO:0005515
Prci6g2806 1188 Pfam Protein tyrosine and serine/threonine kinase 907 1169 IPR001245 GO:0004672|GO:0006468
Prci6g2806 1188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1031 1043 IPR008271 GO:0004672|GO:0006468
Prci6g2806 1188 CDD STKc_MAP3K-like 912 1169 - -
Prci6g2806 1188 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 994 1186 - -
Prci6g2806 1188 Gene3D Phosphorylase Kinase; domain 1 899 993 - -
Prci6g2806 1188 Gene3D - 137 220 - -
Prci6g2806 1188 Pfam PB1 domain 135 218 IPR000270 GO:0005515
Prci6g2806 1188 ProSiteProfiles Protein kinase domain profile. 906 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2806 1188 PANTHER SERINE-THREONINE PROTEIN KINASE 163 1170 - -
Prci6g2806 1188 MobiDBLite consensus disorder prediction 442 520 - -
Prci6g2806 1188 CDD PB1_UP2 122 218 - -
Prci6g2806 1188 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 138 220 - -
Prci6g2806 1188 Gene3D Transferase(Phosphotransferase) domain 1 994 1188 - -
Prci6g2806 1188 SUPERFAMILY Protein kinase-like (PK-like) 895 1168 IPR011009 -
Prci6g2806 1188 ProSitePatterns Protein kinases ATP-binding region signature. 912 937 IPR017441 GO:0005524
Prci6g2806 1188 MobiDBLite consensus disorder prediction 570 596 - -
Prci6g2806 1188 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 899 993 - -
Prci6g2806 1188 SMART serkin_6 906 1172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2806 1188 PRINTS Tyrosine kinase catalytic domain signature 988 1001 IPR001245 GO:0004672|GO:0006468
Prci6g2806 1188 PRINTS Tyrosine kinase catalytic domain signature 1025 1043 IPR001245 GO:0004672|GO:0006468
Prci6g2806 1188 PRINTS Tyrosine kinase catalytic domain signature 1096 1118 IPR001245 GO:0004672|GO:0006468
Prci6g2806 1188 PRINTS Tyrosine kinase catalytic domain signature 1140 1162 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2806 Prci-Chr6 40833940 40843206 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2806 5 540 MAP Kinase Kinase Kinase AT1G16270 38.206 2.73e-91 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Prci6g2806 PK_Tyr_Ser-Thr 1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2806 - - gmx:100799639 1534.24