Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2804 ATGGAATCTGGAAATGAGGAATTGGAGCCTGCATCACAATTAATAATGCATGACCATCTGGATGCCATGCATACCAGTAGAAGGTCTTCTGACCTTCACACATTGGATGTTAAGCCTGTTCTTAATTACTCCATACAGACTGGTGAGGAATTCGCTCTTGAGTTCATGCGAGATAGGGTGAATCTCAAGAAGCCTGGATTTCCAAATGCTGGTGATCCCAATTGCACATCAGGTTACATAAAACTGAAAGACATTCTAGGTGTCAGTCATGCAGGATCTGAAAGTGGATCAGAGATTTCTATGCTTTCAATGGTTGAAAAGGGTCCAAAAGAGTATGATAAAAAGAACTTGTCATTACATGAAGACAGAAGCAATTATGGGTCAGTTCGATCATTACCAAGAACCTCATTCAATCAAGACAAAAATCAATTTGTGCATGGTTATACCTCTTTGGGAGGCTCTGATCTATCAAACACAATGAAAGTTCTTTGCAGCTTTGGTGGTAGAATATTACCTCGGCCAAGTGATGGAAAGCTAAGGTATGTTGGAGGTGAAACACGCATGATCCGTTTAAGAAAAGACATATCTTGGCAGGATCTGATGCATAAAACATTATCAATCTATAATCAAACTCATATACTTAAGTATCAGCTTCCTGGGGAAGAGCTTGATGCTTTGGTATCAGTGTCATCTGATGAGGATTTGCAGAATATGATGGAAGAATGTAACCATCTGGATGATAGAGAAGGATTGCGAAATCTTAGGATGTTTTTGTTTTCAATTAATGATTTAGAGGATGCTCAGGTTGGTCTCAATGTCACGAATGATGATTCTGAGATCCAATTTGTCATTGCTGTCAATGGCATGGACTTAGATCCAAGAAACAACTCAACCCATCTTAGTGTGAGCTCTTTAGCAAATAATTTACACGAATTGGACGGGCACAATGTTGAAAGGGAGACTAGTAGAATTGCTGTAGAAACTGGAGGTTTCAACAAAGCTCACTTGACCAGTAAAATTAGTTCATCATTAACCATGCAGTCTTCCCAGCCAATACCACCAACTTCATCAAATGCTTATGAAACCTATCCACATTTCTATATTGATCAGATGGCACGTCTTGGGGAAATCGTTAGTCAGTATCCAATTCACCAAGACCTTAATGTTTCCCAGAACTCTGCTGATCCTACTACTATTCCTCCTCATGGGATGATTAATCTACCTGGAGCTTTAAATGAGGGCTATTTACCTAGTGGATTACCAGTACAGAATTCCAAAATACTGACAATGCAGGTGACTAATTTGGGTGATAGCTCAGTTCAACAAGGAAGTGACCCTGAGAAAGTTTTAGCCATGCAAACACCACCTGTTGCCCCCTCTCAACCATTTGATGGGTACTTGAAAAATAATTTTCCTGAGGATACAGTAGCTGTTACTTTACAAGAGGGGCATATGCCTTCATCACCTTCAGCAAAAAAAGACCAGCACCAGGATAATCAAGAAGCCTCTTCTACATCTGGCAGTGCACTTGCTCCTGCTTACGCTGATTCCCAGTCCAAACCATATGATCTGAGTGGTCTTCAACCTCCTCCACTTCCAAAGAGAGTTTACTATTCAGAAAGAACTCCCAGAGAGCAAGCTGAGACACTGAATCGCTCCTCAAAGTCAGATGATACTGAGGGCTCTCAGTTTCTTGTGTCAGATTTACTTTCTGATATCAAGCCGCAGGGTTCAGTTGCAGAATCTGGTGACAACATGCATAATAGAAATCTTACCAATCGTTCTGAGGAATTGAACATTGCAGCAAAGCCATTGCATGCAGATGGCCACGCTATTTATAATGGATTTTCCAGACCGCCAATGCATGTGCCTGATGAGAGCAGTCAGACAAAATTTAAGCTATCAGAACATGTAAATCCTGAATTGAGGCAGGCCTTGCCAGACAATAAGGCAAGTAAGGATGAGATAAATGAGGATCAGTTTAATAAGTTGGAAGCTGAAAGTCATTTTAAAGATAACCCGGAGAAGCCTCTGCTTGATGAAAACAAAAACAGTACTTTGCAGCAGCTTCCTTCCGTTAATCATTATGATGATCCAGCATCCGAACTTCCAGAGATCAATTGGAATGACACCTTTAGGAAGGAGTCCAATGATGATTGTGTGACACAAGCACTACCTGTTTCTTCTACTGAGCACCCAGTTGATGATGTTTCTCAAGATTTTCCCTCTAATGTTTTTTCCAAGCAAGCACAAGGTGTTCTTATTAATATTGATGATCGATTTCCCCGTGAATTGCTTTCTAATATGTACTCTCAAGCAACACTTGCAGAAGATTCATCCAGTCTACTTCCGCTAACCAAGGATGGAGTTAGTGTAAGCATAGCCATGGAAAATCATGAACCTAAACCATGGTCATATTTTCATAAATTGGCACAAGGGCTTGATAATGTGACCTTGATTGACCGGGACCATCATGATTTCTCACCTGCACTAGGAAATGAAGCCGGGGATAATAAAATTCCCCTGATTACACCGGTAATGACTGATGGAATATCTCTAGATCATGTAGAATCCCGCCCCAACTTTGGTGAAGAAAATCAGAAAGACTGGGAGGGAATGATTGGAACTGAAACTGCTGAATCAAATTATGGTCATAATCATTCCCAAATGAAGGAAACTGAAAGCATGCAGTTTGATGCTATGATGGGAAACGTAAGAGCACAAGAATCAGAATATGAGGATGTCAATTTTGGAAAAAGAAACAGTAGTCTACCACCTCTGGATCATTCTATAGGAGATGTTGATATCAATACCTTTCAGTTCATAAAGAATGAAGATCTTGAAGAGTTGAAGGAACTGGGTTCTGGTACCTTTGGGACTGTTTATCATGGAAAATGGCGGGGGACCGATGTTGCCATTAAAAGAATCAAGAAAAGCTGCTTCACTGGTCGATCATCTGAACAAGAAAGACTGACTCTAGAGTTCTGGCGCGAAGCTGACATACTTTCCAAACTTCATCATCCAAATGTGGTGGCATTTTATGGTGTGGTTCAGGATGGACCTGGTGGAACAATGGCCACTGTTACTGAATTCATGGTGGATGGTTCGCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTAGGAAGAGGCTGATAATTGCCATGGATGCTGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACATGAAAGATCCTTTACGGCCAATCTGCAAGGTTGGAGATTTTGGGTTGTCAAAAATCAAAAGAAATACCCTGGTATCCGGTGGTGTGCGAGGAACCTTGCCATGGATGGCGCCAGAGCTGCTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTTGATGTATTCTCCTTTGGCATAGTATTATGGGAGATTCTAACGGGTGAGGAGCCGTATGCCAATATGCACTATGGTGCAATTATAGGTGGGATAGTAAATAACACATTAAGGCCAACAATCCCAAGTAATTGTGATTTGGAATGGAGAACACTAATGGAGCAATGTTGGGCGCCGAATCCTGCAGCCCGGCCGTCCTTCTCCGAAATCACTAGTCGCTTGCGTGTAATGTCAGCAGCAGCGAGTCAATCCAAAGCACAAGGCCACAAAGCAGCTAAATGA 3690 0.4136 MESGNEELEPASQLIMHDHLDAMHTSRRSSDLHTLDVKPVLNYSIQTGEEFALEFMRDRVNLKKPGFPNAGDPNCTSGYIKLKDILGVSHAGSESGSEISMLSMVEKGPKEYDKKNLSLHEDRSNYGSVRSLPRTSFNQDKNQFVHGYTSLGGSDLSNTMKVLCSFGGRILPRPSDGKLRYVGGETRMIRLRKDISWQDLMHKTLSIYNQTHILKYQLPGEELDALVSVSSDEDLQNMMEECNHLDDREGLRNLRMFLFSINDLEDAQVGLNVTNDDSEIQFVIAVNGMDLDPRNNSTHLSVSSLANNLHELDGHNVERETSRIAVETGGFNKAHLTSKISSSLTMQSSQPIPPTSSNAYETYPHFYIDQMARLGEIVSQYPIHQDLNVSQNSADPTTIPPHGMINLPGALNEGYLPSGLPVQNSKILTMQVTNLGDSSVQQGSDPEKVLAMQTPPVAPSQPFDGYLKNNFPEDTVAVTLQEGHMPSSPSAKKDQHQDNQEASSTSGSALAPAYADSQSKPYDLSGLQPPPLPKRVYYSERTPREQAETLNRSSKSDDTEGSQFLVSDLLSDIKPQGSVAESGDNMHNRNLTNRSEELNIAAKPLHADGHAIYNGFSRPPMHVPDESSQTKFKLSEHVNPELRQALPDNKASKDEINEDQFNKLEAESHFKDNPEKPLLDENKNSTLQQLPSVNHYDDPASELPEINWNDTFRKESNDDCVTQALPVSSTEHPVDDVSQDFPSNVFSKQAQGVLINIDDRFPRELLSNMYSQATLAEDSSSLLPLTKDGVSVSIAMENHEPKPWSYFHKLAQGLDNVTLIDRDHHDFSPALGNEAGDNKIPLITPVMTDGISLDHVESRPNFGEENQKDWEGMIGTETAESNYGHNHSQMKETESMQFDAMMGNVRAQESEYEDVNFGKRNSSLPPLDHSIGDVDINTFQFIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNMKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSNCDLEWRTLMEQCWAPNPAARPSFSEITSRLRVMSAAASQSKAQGHKAAK 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2804 1229 MobiDBLite consensus disorder prediction 483 561 - -
Prci6g2804 1229 ProSiteProfiles Protein kinase domain profile. 947 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2804 1229 SUPERFAMILY Protein kinase-like (PK-like) 936 1209 IPR011009 -
Prci6g2804 1229 Pfam Protein tyrosine and serine/threonine kinase 948 1210 IPR001245 GO:0004672|GO:0006468
Prci6g2804 1229 MobiDBLite consensus disorder prediction 538 555 - -
Prci6g2804 1229 PRINTS Tyrosine kinase catalytic domain signature 1066 1084 IPR001245 GO:0004672|GO:0006468
Prci6g2804 1229 PRINTS Tyrosine kinase catalytic domain signature 1029 1042 IPR001245 GO:0004672|GO:0006468
Prci6g2804 1229 PRINTS Tyrosine kinase catalytic domain signature 1137 1159 IPR001245 GO:0004672|GO:0006468
Prci6g2804 1229 PRINTS Tyrosine kinase catalytic domain signature 1181 1203 IPR001245 GO:0004672|GO:0006468
Prci6g2804 1229 SMART serkin_6 947 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2804 1229 MobiDBLite consensus disorder prediction 611 637 - -
Prci6g2804 1229 ProSitePatterns Protein kinases ATP-binding region signature. 953 978 IPR017441 GO:0005524
Prci6g2804 1229 SUPERFAMILY CAD & PB1 domains 175 264 - -
Prci6g2804 1229 CDD STKc_MAP3K-like 953 1210 - -
Prci6g2804 1229 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 179 261 - -
Prci6g2804 1229 Gene3D Phosphorylase Kinase; domain 1 940 1034 - -
Prci6g2804 1229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1072 1084 IPR008271 GO:0004672|GO:0006468
Prci6g2804 1229 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 940 1034 - -
Prci6g2804 1229 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1035 1227 - -
Prci6g2804 1229 Gene3D Transferase(Phosphotransferase) domain 1 1035 1229 - -
Prci6g2804 1229 CDD PB1_UP2 163 259 - -
Prci6g2804 1229 SMART PB1_new 174 261 IPR000270 GO:0005515
Prci6g2804 1229 Gene3D - 178 261 - -
Prci6g2804 1229 PANTHER SERINE-THREONINE PROTEIN KINASE 204 1211 - -
Prci6g2804 1229 Pfam PB1 domain 176 259 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2804 Prci-Chr6 40833940 40843207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2804 36 581 MAP Kinase Kinase Kinase AT1G16270 38.889 2.14e-96 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Prci6g2804 PK_Tyr_Ser-Thr 1.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2804 - - gmx:100799639 1582