Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2750 ATGTTTTCCACCGAGAAAGTGATGATGAGGATGAAGCTGCTTCTTCTCATCAATCTACTTGCCATGACCATGGCAGCAACTGAAGCTCAATCCCTTGCCGGATGTCCCGACAAATGCGGAGACGTCGACATTCCATATCCATTTGGTGTCGGGGTGCAGCCTGGTACTTCTCGAAATTGTTTCTTGGATCAGTCATTCAATCTCACTTGTGACAACTCCACGTCCACATTATACTTCGATAACATCACAGTTTCTAGCATATCTCTCCAACAACATCAAATGGACATTTTCATGCTTGTCTCCGAGGGCTGTTACAATCAAACGGGCCAACTACGTTCTCTTTACACCAAGACCTTCACCATTTCCAGCACCCAAAACAAGTTCGTAAGTGTTGGTTGTGACACTCTGGGCATGATTTATTTCCAGAACAACAGCTTGCGGAACAACTTCACACATTACACTGGTTGCGTGGCGTTATGTTACTCACCTCCCCCTAAAGAGATTGACGATAAAACTTGTTCCGGGACAGCATGTTGCCAGGTGGATATTCCTGTGGGAATCAATAACATCAGTTTTGTAGCAGTAAGCGTGTTTAATCATACCAACGTGTTGACCTTCAACAACTGCAGCCATGGTTTTATTGTCAAACATGACTGGTTTCATTTCTCCTTCGATTACCTACGTGACTTTCCCTATGATAGGGTCCCCGTGGTACTAGATTGGAGTGTTTCGAATGTTACTTGTCGAACTGCTTCCAGAAGTAAAGCAGACTATGCCTGCAAATCCAACACAGAATGTGTGGATTCCAGTGATGGAGTTGGATACAAGTGCATATGCAAACCCGGTTTTGAGGGCAATCCTTACCATCCAAATGGGTGCCATGATGTTGATGAGTGCAGCAGACCCAATAACTGCAGTATACACAGCCAATGTATCAATTTGAATGGTACCTACAAATGTGTTTGTCCGCCTGGATACAAAGGCATCGCCTACAACAATGGAACGGGCTGTAGTTTGGACACTTCTCCATCTAATCAAAATTTGAGTATTCTTATAATTGCATTAGGTGTGAGTGTGGCCTTGTTAGCTGTCTTCACACTGGTCTCCACATTATGTTGGGCACGCAAGCAAAGAACTTTAAAACAACTTAGAGAAAGAAATTTTGAGCAAAATGGAGGCAACATATTATTGCAACAACTTTCTGAACAACAAGGCTACACAGATAGAATCAAAATATTTACAGAAGTTGAGCTTAAGAATGCAACAAACAACTTTGATCAATGTCGAATTCTAGGTCGCGGGGGACAAGGCACAGTTTATGATGGTATCTTACAGGACAATAGACATGTTGCAATTAAGAAGTCTAGAATAGGAGGAGATCCTAGACAAATTAAGGATTTTATCAATGAAGTGTTTGTTCTTTCTCAAATCAATCACCGAAATGTAGTCAAACTTTTAGGGTGTTGTCTTGAAACTGAAGTCCCTTTGTTAGTATATGAGTTTGTTGATAATGGCACTCTTCTTGATCACATTGATCCTTTGAAGAATGAGTTTTCTATTTCATGGGAGACCCGATTAAGGATAGCTGTAGAGACTGCTGAAGCCATTTCATATTTACATTCTTCTGCTTCCATTCCAATTATTCATCGGGATATTAAATCTACCAATATACTTTTAGATCATAATCTCAAAGCAAAAGTATCTGACTTTGGTGCTTCAAGACTTGTTCCTCTTGATGAAACTCATGTTACCACTGTAGTACAAGGGACTCTTGGATATTTGGATCCAGAGTACCTCCATACTGGTCAATTTGATGAGAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTGTAGAGCTACTCACAGGCAAAAAAGCAGTTCAATTTAGTATGCCAGAACAAAGAAATCTAGCTATGTATTTTGTGTCTTCAATGAAAGAAGATCGCTTGTGGGAAATTCTTGACAAACAAGTGTATGATGGAAATAATACAAATCAGCTGAAAGAAGTAGCCTTATTGGCATGGAGGTGCGTTAAAGTAAAAGGAGAGGAAAGACCCACTATGAAGGAAGTAGCGAAAGAGCTAGAGGGTCTTGTTGCAATTGAAAAGCATCCGTGGGTGAAAGGTGAAGATCTTATGTCAGAAGAAAGTGAATACTTACTTGGTCATGTACCTGATATGTATGGGGCAACTATTGCCGCAGGTACTTCAGCTTCCTATGATACAATGTTAAAGGACATTGCATTAGAGATTGCGGATGGCAGATGA 2268 0.4083 MFSTEKVMMRMKLLLLINLLAMTMAATEAQSLAGCPDKCGDVDIPYPFGVGVQPGTSRNCFLDQSFNLTCDNSTSTLYFDNITVSSISLQQHQMDIFMLVSEGCYNQTGQLRSLYTKTFTISSTQNKFVSVGCDTLGMIYFQNNSLRNNFTHYTGCVALCYSPPPKEIDDKTCSGTACCQVDIPVGINNISFVAVSVFNHTNVLTFNNCSHGFIVKHDWFHFSFDYLRDFPYDRVPVVLDWSVSNVTCRTASRSKADYACKSNTECVDSSDGVGYKCICKPGFEGNPYHPNGCHDVDECSRPNNCSIHSQCINLNGTYKCVCPPGYKGIAYNNGTGCSLDTSPSNQNLSILIIALGVSVALLAVFTLVSTLCWARKQRTLKQLRERNFEQNGGNILLQQLSEQQGYTDRIKIFTEVELKNATNNFDQCRILGRGGQGTVYDGILQDNRHVAIKKSRIGGDPRQIKDFINEVFVLSQINHRNVVKLLGCCLETEVPLLVYEFVDNGTLLDHIDPLKNEFSISWETRLRIAVETAEAISYLHSSASIPIIHRDIKSTNILLDHNLKAKVSDFGASRLVPLDETHVTTVVQGTLGYLDPEYLHTGQFDEKSDVYSFGVVLVELLTGKKAVQFSMPEQRNLAMYFVSSMKEDRLWEILDKQVYDGNNTNQLKEVALLAWRCVKVKGEERPTMKEVAKELEGLVAIEKHPWVKGEDLMSEESEYLLGHVPDMYGATIAAGTSASYDTMLKDIALEIADGR 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2750 755 Pfam EGF-like domain 258 286 IPR000742 -
Prci6g2750 755 FunFam Fibrillin 2 294 334 - -
Prci6g2750 755 Gene3D Laminin 299 339 - -
Prci6g2750 755 SUPERFAMILY Protein kinase-like (PK-like) 403 701 IPR011009 -
Prci6g2750 755 FunFam Wall-associated receptor kinase 2 395 501 - -
Prci6g2750 755 Pfam Wall-associated receptor kinase galacturonan-binding 35 95 IPR025287 GO:0030247
Prci6g2750 755 CDD EGF_CA 295 328 - -
Prci6g2750 755 SUPERFAMILY EGF/Laminin 295 330 - -
Prci6g2750 755 Pfam Protein tyrosine and serine/threonine kinase 428 695 IPR001245 GO:0004672|GO:0006468
Prci6g2750 755 ProSiteProfiles Protein kinase domain profile. 425 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2750 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Prci6g2750 755 Pfam Wall-associated kinase 170 280 IPR013695 GO:0004674|GO:0016020
Prci6g2750 755 SMART serkin_6 425 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2750 755 FunFam Wall-associated receptor kinase 2 246 293 - -
Prci6g2750 755 Gene3D Laminin 247 298 - -
Prci6g2750 755 Gene3D Transferase(Phosphotransferase) domain 1 502 711 - -
Prci6g2750 755 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 311 322 IPR000152 -
Prci6g2750 755 SMART egfca_6 295 338 IPR001881 GO:0005509
Prci6g2750 755 Gene3D Phosphorylase Kinase; domain 1 397 501 - -
Prci6g2750 755 ProSiteProfiles EGF-like domain profile. 295 338 IPR000742 -
Prci6g2750 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 698 IPR045274 GO:0007166
Prci6g2750 755 CDD STKc_IRAK 431 698 - -
Prci6g2750 755 FunFam Wall-associated receptor kinase 2 502 718 - -
Prci6g2750 755 ProSitePatterns Calcium-binding EGF-like domain signature. 295 320 IPR018097 GO:0005509
Prci6g2750 755 SMART egf_5 298 338 IPR000742 -
Prci6g2750 755 SMART egf_5 247 294 IPR000742 -
Prci6g2750 755 Pfam Calcium-binding EGF domain 295 335 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2750 Prci-Chr6 39675880 39680350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2750 13 755 Receptor kinase-like Gene Family AT1G21230 45.395 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci6g2750 PK_Tyr_Ser-Thr 8.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2750 - - pcin:129293718 1007.28