Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2725 ATGAAAGACGATTTTCCATTGGGTGGTATTGATACAGCATGTGGTTCCCCAAGGCATCTCAAAAAGCCAAACCAAGCTGCCAAAAAGCCAACTGAATCCCAGAAAACAGAACTACACAGCAAGAAGATGACGTCTGCAAATCCTGATCCTCAAGCTACCTCATCTACAGTAACCACGGGAATCACAAGGGGTTTACCTTCACCTTCAAGAACCAACAATCATGGCTATAGCAGTGGCAATAGCTCACGTAGTGACAGTTTAGAAAGCACAAGTGGTGCACCCATTAAGCCACATACTGGTGGTGATGTAAGGTGGGATGCCATTAACATGGTTTCCAGAGGAGCCCCTCTTGATCTTAGCCATTTTCGGCTTCTCAAGCGAATTGGGTATGGGGATATTGGGAGTGTGTATCTTGTAGAACTCAGAAAAACTAAGACTTATTTTGCCATGAAAGTGATGAACAAGGCAGCTCTTATAAGTAGGAATAAACTTCTAAGAGCACAGACAGAGAGGGAGATTCTTCAACTTCTTGATCACCCTTTCTTACCCACTCTGTATTCTTACTTTGAAACTGATAAGTTCTATTGTTTGGTCATGGAGTTCTGCAGTGGAGGTAACCTTCACTCTCTTAGACAGAAGCAGCCAAACCAGCATTTCACAGAAGAAGCAGCACGGTTCTATGCTTCAGAGATATTGTTAGCTCTTGAATACCTGCATATGCTAGGCATAGTGTATAGAGACTTAAAGCCAGAGAATGTCTTGGTCAGAGATGAGGGCCATATAATGCTCTCAGATTTTGATCTATCCCTTCGCTGCTCGGTCAATCCTATGCTCATCAAGTCTTCATCTGCCCATGTAAGCAGCAGCAGCAGTGGCAACAGTGGTTCTAGTTCTGGGGTTGTTTTGGATGACCAGCAAGCAGTGCAGAGTTGTATGCAGCCATCAACTTTCTTCCCACGCATTTTACCATCAAAGAAAAACCGAAAATCAAAGTCTGATTTCGGCCTCATAAATGGAGGTACCGCCCTCCCTGAATTCATGGCAGAGCCTTCAGATGTGAGGTCAATGTCCTTTGTAGGGACACATGAATATCTTGCACCTGAAATCATCCGGGGAGAAGGTCATGGCAGTGCAGTAGATTGGTGGACTTTTGGGATCTTCTTGTATGAGCTTCTACACGGGACAACACCCTTCAAAGGTGCTGGAAATAGGGCCACGCTTTTCAATGTTGTAGGACAGCCCTTAAGGTTCCCAGAAACTTCCCAGGTGAGTTCTGCAGCAAAAGACCTTATCAAAGGATTGCTAGTGAAGGAACCTCCAAAGCGCATTGCATATATAAGGGGTGCAACAGAAGTAAAACAGCACCCATTTTTTGAGGGAGTAAACTGGGCTCTAGTAAGAAGTGCCCTGCCTCCTCATATACCAGATCCTGTAGATTTTACCAAGTATGCTGGCAACGAATCAGCAGAAGCAGCGGACAAGGTGATAGGTATTGCAAAAGACAAACATGGCCCAAATGGCTCTGCTAATTCTTATATGGATTTTGAGTATTTCTAA 1557 0.4438 MKDDFPLGGIDTACGSPRHLKKPNQAAKKPTESQKTELHSKKMTSANPDPQATSSTVTTGITRGLPSPSRTNNHGYSSGNSSRSDSLESTSGAPIKPHTGGDVRWDAINMVSRGAPLDLSHFRLLKRIGYGDIGSVYLVELRKTKTYFAMKVMNKAALISRNKLLRAQTEREILQLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNQHFTEEAARFYASEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPMLIKSSSAHVSSSSSGNSGSSSGVVLDDQQAVQSCMQPSTFFPRILPSKKNRKSKSDFGLINGGTALPEFMAEPSDVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLFNVVGQPLRFPETSQVSSAAKDLIKGLLVKEPPKRIAYIRGATEVKQHPFFEGVNWALVRSALPPHIPDPVDFTKYAGNESAEAADKVIGIAKDKHGPNGSANSYMDFEYF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2725 518 FunFam Serine/threonine-protein kinase D6PK-like 120 205 - -
Prci6g2725 518 FunFam serine/threonine-protein kinase D6PK-like 206 273 - -
Prci6g2725 518 CDD STKc_phototropin_like 120 479 - -
Prci6g2725 518 MobiDBLite consensus disorder prediction 1 99 - -
Prci6g2725 518 Gene3D Transferase(Phosphotransferase) domain 1 206 273 - -
Prci6g2725 518 MobiDBLite consensus disorder prediction 25 39 - -
Prci6g2725 518 Gene3D Phosphorylase Kinase; domain 1 120 205 - -
Prci6g2725 518 Pfam Protein kinase domain 123 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2725 518 Pfam Protein kinase domain 333 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2725 518 MobiDBLite consensus disorder prediction 40 93 - -
Prci6g2725 518 PANTHER FLIPPASE KINASE 1-RELATED 32 484 - -
Prci6g2725 518 SUPERFAMILY Protein kinase-like (PK-like) 115 479 IPR011009 -
Prci6g2725 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Prci6g2725 518 SMART serkin_6 122 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2725 518 FunFam Serine/threonine-protein kinase AGC1-7 351 476 - -
Prci6g2725 518 Gene3D Transferase(Phosphotransferase) domain 1 333 476 - -
Prci6g2725 518 ProSiteProfiles Protein kinase domain profile. 122 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2725 Prci-Chr6 39458626 39463025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2725 87 518 AGC Kinase Gene Family AT1G79250 73.111 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci6g2725 Pkinase 2.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2725 - - qsa:O6P43_029431 734.947