Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2677 ATGGGCTTCTTTTCTAAACAATCGCTTCATTTTGTATTTTATATCAGTCCCTTAGCTATTCACTGCCTTTTTCTTAGTATATCATCATCAACCGCTCTAGACATCACCACAGATACAGAAGCTTTGATCTCATTTAAGTCCCAATTGAGTGATATTGATACTCTTCACCCTCTATCTTCTTGGAACCAGAGTTCATCATCACCATGCAACTGGTATGGTGTTACCTGTAATAGGTTTGGCCAAAGAGTGGTAGGCTTAAATCTTTCAAGCTTAAGACTCTCAGGTCAGTTAAGCCCCTATATAGGTAACCTCTCTTTTCTGGAGTCCCTTCAGTTGCAGGGTAACCAGTTTACAGGAGTGATTCCCGAGCAAATTGGCCATCTCATTAGGTTAAGAGCCCTAGACTTGAGTTCTAACAGAATAGAAGGCATGCTTCCCTCAAACATCACTCGCTTGGTCAACCTCGTCAAACTGAACTTATCTTCAAACAATATAGCCAGCCAAATTCCTCAAGATATTGATAGCATGAAAAAGCTTCAAGTCCTGAAACTGGGAAGCAATAAGTTTTATGGTGCAATTCCACCTACTCTCGGAAATATTTCATCACTCACAAATATCAGCTTTGGCACAAACAGTCTGAGGGGTGGGATTCCCAATGAATTTGGCAGGCTCAAGAACTTAACTGAGCTTGATCTCACCATTAACAATCTCACTGGGACTATTCCTCCTTCTATTTATAACTTATCTTCCCTTGTTAACTTGGCTGTTGCTGCCAACGATTTTTGGGGTGATATTCCTCAGGATGTTGGTCACAAACTTCCAAAACTTCTAGTGTTCAATTTCTGCTTTAATAGATTCACAGGTAGAATTCCTGGGTCTCTTCACAATCTTACCAACATCCGAGTTATCCGCATGGCCTCAAATCTCTTGGAAGGAACAGTGCCACCAGGTCTTGGAAATCTTCCATTCCTTCGCATGTATAATATAGGATATAATAGGATAGTAAGCTCAGGAGACAGAGGTCTAGACTTCATTACTTCACTGGCAAACAGCACCCTCTTGAACTTTCTTGCAATTGATGGCAATAGGTTGGAAGGTGTAATTCCAGAGACCATTGGAAATCTCTCCAAGGTTCTCTCAAAATTATACATGGGAGGGAATCGTTTGTATGGAAACATACCCCCATCAATTGGAAATCTTAGAGGCTTGAGTTTGTTAAACTTGAGTCACAATGATGCAATCTCAGGAGAAATTACTTCCGAGCTAAGCCAATTGGAGGAACTGCAAGAGCTAAATCTGGCTGGGAATCAGATATCTGGAAGTATTCCAAACTCCCTTGGTCGTCTCCAGAAGCTAAACAGTCTTGATTTATCAAGCAATCAGCTTGTGGGTGAAATACCAACAAGTTTTGGGAATTTTCAGAGCATTGTCTTCATGGACTTGTCTCATAACAAGCTCAACGGAAGCATACATAGACAGATTCTAAGTCTCTCTTCTCTAAGCACTGTTTTTAACTTGTCTAAGAACTTCTTAAGTGGATCTTTGCCTCAAGAGGTAGGGAATTTGATCAGAGTTTCTACCTTAGACTTCTCTGACAATCTTTTGGTTGGTGATATCCCCAGCTCAATTAGCAATTGTCTAAGCCTAGAAAGGCTATTTTTGGCACGAAATATGCTTTCTGGTCTTATTCCAAAAGCTTTAGGAAGCATCAGAAGCTTGGAAATTCTTGACCTTTCTTCCAACCAACTCTCTGGATCCATTCCTGTTGAACTTCAAAATCTAAAAGCCCTGCAGTTATTGAACCTTTCTTATAATGACCTAGAAGGAGCAGTTCCCAGTGGTGGTGTTTTCGCAAATCTCTCTTCTTTCCATTTTGAAGGCAATAAGAAACTGTGCTTACTTTCCTCGTGTGTGACTCAAGGCCATGGAAAAAAGATCTTCGTAGTTTCTATCACCGTAGCTATCGTGGTGACATTGATACTATGTTTCACAATTGGCTTATTGTATGTGAGGAGTAGAAAATCAAAGGCAGCAACCCCGCTTAAAACGGTGGAGCCATATCATCCCATGGTCTCTTATGATAAGCTTCGACGAGCCACTGGGGACTTCAGTCAAGAAAATTTAATCGGAACTGGAAGCTTTGGTTTGGTGTACAAAGGCCATCTCGGTGAAGTGAGCATCAGCACTGTTGCAGTAAAAGTACTAGATACTTTAAGGTCAGGCTCCTTGAAGAGTTTCTTCGCAGAATGTGAGGCTTTGAAGAATGCACGGCATCGAAATCTAGTAAAGCTAATCACGTCGTGTTCTAGTATAGACTTCAAGAACAATGAATTTCTGGCTTTGGTTTATGAGTTCATATGCAACGGCAACTTGGATGATTGGATTAAGCAAAAGAAAAGGCATGCAAATGGAAATGGGTTGAATCTTATGGAAAGACTGAAAATTGCCATTGATGTTGCTTGTGCATTGGATTATCTTCACAATGACACTGAAACTCCCATTGTGCATTGTGATTTGAAGCCTAGCAATGTTCTTCTGTGTGAAGATATGAGTGCAAAGGTGGGCGATTTTGGATTGGCTAGACTGTTGATTGAAAGACCAACTAATCAAGTCTCAATAAGCTCCACTCATGTCCTCAAAGGTTCAATCGGCTACATACCTCCAGAGTATGGATGGGGAGAAAAGCCATCAGTAGCAGGAGATGCATACAGTTTTGGGATTGTATTGCTAGAACTCTTTTCTGGGAGGAGCCCAATAGATGATAGATTCACAGGTGGCCTGAGCTTAACAAGATGGGTTCAATCAGCATTCCCAGACAAGATTGAGCAAGTCGTAGACCCTCAGCTTCTATCACACACTTTTGACAATGACCTTGCTCCTAAAGGTCCAAATCTGCAGCTGATTGATTGTGTGACTACAATTCTGAGAATTGGGTTATCCTGCACTGCAGATTCTCCAGATGGACGCCTTAAGATGAAGGATGTTGTTGCAAAATTGAAAAATGTCAGAGACACTTTCTTGAAACTCAACAAGAACATTCACTCCAACCATTAG 3054 0.4106 MGFFSKQSLHFVFYISPLAIHCLFLSISSSTALDITTDTEALISFKSQLSDIDTLHPLSSWNQSSSSPCNWYGVTCNRFGQRVVGLNLSSLRLSGQLSPYIGNLSFLESLQLQGNQFTGVIPEQIGHLIRLRALDLSSNRIEGMLPSNITRLVNLVKLNLSSNNIASQIPQDIDSMKKLQVLKLGSNKFYGAIPPTLGNISSLTNISFGTNSLRGGIPNEFGRLKNLTELDLTINNLTGTIPPSIYNLSSLVNLAVAANDFWGDIPQDVGHKLPKLLVFNFCFNRFTGRIPGSLHNLTNIRVIRMASNLLEGTVPPGLGNLPFLRMYNIGYNRIVSSGDRGLDFITSLANSTLLNFLAIDGNRLEGVIPETIGNLSKVLSKLYMGGNRLYGNIPPSIGNLRGLSLLNLSHNDAISGEITSELSQLEELQELNLAGNQISGSIPNSLGRLQKLNSLDLSSNQLVGEIPTSFGNFQSIVFMDLSHNKLNGSIHRQILSLSSLSTVFNLSKNFLSGSLPQEVGNLIRVSTLDFSDNLLVGDIPSSISNCLSLERLFLARNMLSGLIPKALGSIRSLEILDLSSNQLSGSIPVELQNLKALQLLNLSYNDLEGAVPSGGVFANLSSFHFEGNKKLCLLSSCVTQGHGKKIFVVSITVAIVVTLILCFTIGLLYVRSRKSKAATPLKTVEPYHPMVSYDKLRRATGDFSQENLIGTGSFGLVYKGHLGEVSISTVAVKVLDTLRSGSLKSFFAECEALKNARHRNLVKLITSCSSIDFKNNEFLALVYEFICNGNLDDWIKQKKRHANGNGLNLMERLKIAIDVACALDYLHNDTETPIVHCDLKPSNVLLCEDMSAKVGDFGLARLLIERPTNQVSISSTHVLKGSIGYIPPEYGWGEKPSVAGDAYSFGIVLLELFSGRSPIDDRFTGGLSLTRWVQSAFPDKIEQVVDPQLLSHTFDNDLAPKGPNLQLIDCVTTILRIGLSCTADSPDGRLKMKDVVAKLKNVRDTFLKLNKNIHSNH 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2677 1017 ProSitePatterns Protein kinases ATP-binding region signature. 709 733 IPR017441 GO:0005524
Prci6g2677 1017 SUPERFAMILY Protein kinase-like (PK-like) 681 999 IPR011009 -
Prci6g2677 1017 Gene3D Phosphorylase Kinase; domain 1 665 785 - -
Prci6g2677 1017 Gene3D Transferase(Phosphotransferase) domain 1 786 1015 - -
Prci6g2677 1017 SUPERFAMILY L domain-like 36 334 - -
Prci6g2677 1017 SMART LRR_typ_2 449 472 IPR003591 -
Prci6g2677 1017 SMART LRR_typ_2 224 248 IPR003591 -
Prci6g2677 1017 SMART LRR_typ_2 570 593 IPR003591 -
Prci6g2677 1017 SMART LRR_typ_2 425 448 IPR003591 -
Prci6g2677 1017 SMART LRR_typ_2 128 151 IPR003591 -
Prci6g2677 1017 SMART LRR_typ_2 594 619 IPR003591 -
Prci6g2677 1017 SMART LRR_typ_2 497 522 IPR003591 -
Prci6g2677 1017 SMART LRR_typ_2 152 176 IPR003591 -
Prci6g2677 1017 SMART LRR_typ_2 104 127 IPR003591 -
Prci6g2677 1017 SMART LRR_typ_2 297 321 IPR003591 -
Prci6g2677 1017 ProSiteProfiles Protein kinase domain profile. 703 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2677 1017 FunFam LRR receptor-like serine/threonine-protein kinase EFR 674 785 - -
Prci6g2677 1017 ProSiteProfiles Leucine-rich repeat profile. 427 449 IPR001611 GO:0005515
Prci6g2677 1017 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 786 1012 - -
Prci6g2677 1017 Gene3D Ribonuclease Inhibitor 272 340 IPR032675 -
Prci6g2677 1017 Gene3D Ribonuclease Inhibitor 35 196 IPR032675 -
Prci6g2677 1017 PRINTS Leucine-rich repeat signature 570 583 - -
Prci6g2677 1017 PRINTS Leucine-rich repeat signature 131 144 - -
Prci6g2677 1017 PANTHER OS04G0122200 PROTEIN 222 1005 - -
Prci6g2677 1017 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Prci6g2677 1017 Gene3D Ribonuclease Inhibitor 341 639 IPR032675 -
Prci6g2677 1017 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Prci6g2677 1017 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Prci6g2677 1017 Pfam Leucine rich repeat 427 486 IPR001611 GO:0005515
Prci6g2677 1017 Pfam Protein tyrosine and serine/threonine kinase 706 998 IPR001245 GO:0004672|GO:0006468
Prci6g2677 1017 ProSiteProfiles Leucine-rich repeat profile. 572 595 IPR001611 GO:0005515
Prci6g2677 1017 SUPERFAMILY L domain-like 378 634 - -
Prci6g2677 1017 FunFam Leucine-rich repeat receptor-like protein kinase 35 195 - -
Prci6g2677 1017 SMART serkin_6 703 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2677 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Prci6g2677 1017 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 641 - -
Prci6g2677 1017 Gene3D Ribonuclease Inhibitor 199 271 IPR032675 -
Prci6g2677 1017 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 234 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2677 Prci-Chr6 38724814 38728346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2677 37 1011 Receptor kinase-like Gene Family AT3G47570 42.500 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2677 PK_Tyr_Ser-Thr 5.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2677 - - gmx:100783512 1337.01