Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2661 ATGGAGCTTGGCTTGAGCTTAGGAGCTTCAAAGCCTTTCACTTTTACGGAAAAGCCTCCTGAATTAGAATTAGCTAATCTCAACACTACTTTATCGATCGGTCCAATAATCAGCAGCACCAAAAGCTGCGACGATCTTCGTCAACAAGGCGAACAACAAGAAGAAGATCAAGAAGAAACAGAGAAGAAGCAAAATCACAGTACTGTCAAAGAAGATCAACACGTTGCTTCAAAGTATAGTAACGCCTTGCAGCTTCATCTTCTTCCTCACGCCAAACCTCTCCCTCTGTACTCGTGGCCTCCTCCCTCTGATCAGAACTGTGATGATGAAGTGGCAGCTAACTCTGGGAGGGGTTTGAAGGTGAAGACGTCGCCGGCGGAGGAGGACGAGTCGGAGGAGAGAACGGTGCTGTCATCGTCTCCGATGAGCGGAGCATCGTCGTTTCAGGTGGATCTGTGTGTATACAGTAATAACAAAGGAGGGAGTAGCATGAGCGGATCAGGAAATTACAGTAATAATTATTGTAACAATAAAAAGAGGCAGATTAATGAATTATCAGAAGGTGAAGGTAATTACTATGATCCAATCCGAGGTTGTTCATCAAGAGCAAGCGATGAAGATGACAACGTTGGAGGTCGTGGTGGTGGTACCAGGAAGAAACTCAGGCTGTCTAAAGAACAGTCTGCTTTTCTCGAAGAAAGCTTCAAAGAACACAGTACTCTTAATCCTAAACAAAAACTTGCTCTTGCCAAACAGCTCAATCTTCGTCCTCGCCAAGTCGAAGTCTGGTTTCAAAACCGAAGAGCGAGGACGAAGCTGAAGCAGACGGAGGTGGATTGTGAGTACTTGAAGAGATGCTGTGAGACGCTATCAGAAGAGAACAGGAGGTTGCAGAAGGAGCTTCAAGAACTGAGGGCTTTGAAGGCTTCAAACTCAAACCCTTTCTTCATGGAATTACCAGCAACCACCTTGACCATGTGCCCTTCCTGTGAGCGCGTCGCACCCAATCCCACCTCCAATAATAATAATTCTAACAACAACAACAACAGTAATAATTCCCCTTCCAAACCCAAGGCCTTCCCATTCGCCAGACCCAAGTTCTATCCTTTCCCTCACTCCAAACCACACCAGTCTTGA 1137 0.4591 MELGLSLGASKPFTFTEKPPELELANLNTTLSIGPIISSTKSCDDLRQQGEQQEEDQEETEKKQNHSTVKEDQHVASKYSNALQLHLLPHAKPLPLYSWPPPSDQNCDDEVAANSGRGLKVKTSPAEEDESEERTVLSSSPMSGASSFQVDLCVYSNNKGGSSMSGSGNYSNNYCNNKKRQINELSEGEGNYYDPIRGCSSRASDEDDNVGGRGGGTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLSEENRRLQKELQELRALKASNSNPFFMELPATTLTMCPSCERVAPNPTSNNNNSNNNNNSNNSPSKPKAFPFARPKFYPFPHSKPHQS 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2661 378 SUPERFAMILY Homeodomain-like 195 275 IPR009057 -
Prci6g2661 378 MobiDBLite consensus disorder prediction 42 76 - -
Prci6g2661 378 FunFam Homeobox-leucine zipper protein 18 201 279 - -
Prci6g2661 378 ProSitePatterns 'Homeobox' domain signature. 249 272 IPR017970 GO:0000981|GO:0006355
Prci6g2661 378 Gene3D - 222 272 - -
Prci6g2661 378 MobiDBLite consensus disorder prediction 198 219 - -
Prci6g2661 378 SMART halz 274 319 IPR003106 GO:0006355|GO:0043565
Prci6g2661 378 MobiDBLite consensus disorder prediction 335 378 - -
Prci6g2661 378 Pfam Homeodomain 218 272 IPR001356 GO:0003677
Prci6g2661 378 MobiDBLite consensus disorder prediction 92 144 - -
Prci6g2661 378 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 60 357 - -
Prci6g2661 378 ProSiteProfiles 'Homeobox' domain profile. 214 274 IPR001356 GO:0003677
Prci6g2661 378 MobiDBLite consensus disorder prediction 200 219 - -
Prci6g2661 378 Pfam Homeobox associated leucine zipper 274 308 IPR003106 GO:0006355|GO:0043565
Prci6g2661 378 Coils Coil 43 63 - -
Prci6g2661 378 Coils Coil 280 310 - -
Prci6g2661 378 MobiDBLite consensus disorder prediction 56 73 - -
Prci6g2661 378 MobiDBLite consensus disorder prediction 335 357 - -
Prci6g2661 378 SMART HOX_1 216 278 IPR001356 GO:0003677
Prci6g2661 378 CDD homeodomain 218 275 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2661 Prci-Chr6 38510676 38512698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2661 184 370 Homeobox Transcription Factor Family AT4G37790 57.592 1.01e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci6g2661 Homeodomain 1.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2661 K09338 - gmx:100778742 316.235