Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2659 ATGGAAAAGCAACGAAACCAAAATCACCACCACCACCACCGTAATCCCGACAACAAGAACCACCACCACCGCCACCATCACCACCGTCAAACTTGGGGCACGTGGGAGGACCTTCTCCTCGCCTCCGCTGTCAAACGCCATGGCTTCAACGACTGGGACACCGTCGCCATGGAGATCCAGAACCGCACCAACCTCCCCCACCTCCTCACCACCGCCCGTAACTGCGAGGAGAAATTCCTCGATCTTGAACGCCGATTCACCGCCCAATGCAACGACGCCGTTCGGGACCTTCCGGAGAACGGCGCTATCACCGGCGACGTCGTCGATCATGTCCCCTGGCTCGACGAATTGCGTAAGCTACGGGTGGCCGAGCTCCGGCGAGAGGTTCAACGTCACGACGTCTCCATTCTGTCGTTGCAGCACAAGGTGAAGAGATTGGAGGAGGAGAGAGAAAAGAGCGTGAAAGAGAATGACGCAGAACGGGATGAGAAACCAGATCTGGAAGACTCCGGGAAACCGGAAAACGACGAAAAGAACGGAGGAGGGGGAGGAGGAGGAGGAGAACCTGAACCGGCGAATTCTGAACCGGGGAGGCGGCTCGATGACGATGGAAATGATAATAGTAACGATAATAATAATAACATTAACAGCAGTAGTAATAAGCTTCCAACGGGGACGACTCCGACAGGGAGAACCAATCAGTTAACGAGTCTAATTCGACCGGTTCAAGATCCGCGGGAGAGAAAACCGGGGAGGAGGATGCAAAGCCAGAACCGCCTCCGGTCCAGCCCGGTCCGAAACAACCGGATCCTAGCGAGATGGATAAAAGAGGAGGACTCGTCCGAGTTGAGAGACTCGGCGGCCCACTCGGAAGGGGAAGGGACGAGGGAGAGCGGCGAGGTGCAGAGCTCGGCGAGCTTGACGAGGAAGAGGAAGGCGAGGAAGAGGAAGAAGGTCTCCGGAAGCGGAGGAAACGGCGAGGAAGAGGCGCCGGAGAACGACGAGTTGGCGGCGAAATCACAACCGTTGATTGGCCTATTGGAGATCATCAAAGGACATGAAAACAGCTCGTTGTTCGAGCGCCGTCTTGAAAGCCAGGACGAATGGGAAAAATACAACAGCACGGTACGTGAGCACGTGGACTTGGAAATCATACAAACGCGACTTCGAAATGGCTATTACTCTTCCCACACCAAAGCCTTCTTCCGTGACCTCTTCCTTCTCTTCACTAACTACATCGCCTTCTTCCCCGCTCACTCCGTCCACTCACGCGCCGCCGCCCAGCTCTGCACTCTCGTCTCCGACGAGATCAAGAACTTCATCCAACCCCACATTATTAACAGCCCTCCTAATAATTCACTCCCACCTCCGCCACCGTCATCACCGTCACTCAAGCCTGATTCTTCTTTGCTTTCCAAGCACAAAGCTTCCGCTCCCATATTGGTTTGCCGGAAACGCACTTCCATGTCCAACAAACCTTCCTCTGCTTCCACCTTTGCCCATAAGGGTAATGACCGGTTAAGCAGCGAGAAGAGGCCACCGCCACCGCCACCACCCCAGAAGAGACCACCGTCAGTTTCTGATGATTCCGATGATGAACTTCCTTCTCCTCCCCCTTCTGCTCCTCCTTCTCTGCCACCTCGGTCGAAAGAGAAGCCGGTGACTGGAGCAAGAAGCATGAGAAGAAGCAGCAAAAACCTCGGCGGCGGCGGCGCCATCCAGAACAAGAAGCTTCAGTCCAGCCAAGCAAGCCCTCCCAAATCAGATAACAAAAGCAAAGCGTCTTCAGCAGCAGATCAAGAACAAGCAGCATCAGCGTCGGACAAGAAGAGGAGCGCTGCAGCAGATTTCTTGAAAAGAATAAAGAAAAACAGTGCCGGCGAGGCGATGAGGGGCGGCGGAAACAGCCGAGGAGGAGGCGGCGGCGGGAGAGATCAGAAGAAGGCGACGGGTGGTGGTGGTGGTGGTGGGAAGAGTGAACAGAAAGGGAGAGAGAAGACACAGAGGCATGTTGGTGGATCGGGGGAGAAGAAGAGCAGTGAGAATAATAATAATAACAACAATACAGAGAATAGCAACCAGTCAAGGAGAAGTGTAGGGAGGCCACCAAAGAAGGTAGCAGGAGAGAGCAGTAATAATAATAACAGTGCTTCAGTTTCTGCAAAACGTGGAAGGGAACGAAGTGGTAATGGTGGGAGAGAAAAGAGGCCAAAGAAACGAACTAGGAAGTGA 2232 0.5412 MEKQRNQNHHHHHRNPDNKNHHHRHHHHRQTWGTWEDLLLASAVKRHGFNDWDTVAMEIQNRTNLPHLLTTARNCEEKFLDLERRFTAQCNDAVRDLPENGAITGDVVDHVPWLDELRKLRVAELRREVQRHDVSILSLQHKVKRLEEEREKSVKENDAERDEKPDLEDSGKPENDEKNGGGGGGGGEPEPANSEPGRRLDDDGNDNSNDNNNNINSSSNKLPTGTTPTGRTNQLTSLIRPVQDPRERKPGRRMQSQNRLRSSPVRNNRILARWIKEEDSSELRDSAAHSEGEGTRESGEVQSSASLTRKRKARKRKKVSGSGGNGEEEAPENDELAAKSQPLIGLLEIIKGHENSSLFERRLESQDEWEKYNSTVREHVDLEIIQTRLRNGYYSSHTKAFFRDLFLLFTNYIAFFPAHSVHSRAAAQLCTLVSDEIKNFIQPHIINSPPNNSLPPPPPSSPSLKPDSSLLSKHKASAPILVCRKRTSMSNKPSSASTFAHKGNDRLSSEKRPPPPPPPQKRPPSVSDDSDDELPSPPPSAPPSLPPRSKEKPVTGARSMRRSSKNLGGGGAIQNKKLQSSQASPPKSDNKSKASSAADQEQAASASDKKRSAAADFLKRIKKNSAGEAMRGGGNSRGGGGGGRDQKKATGGGGGGGKSEQKGREKTQRHVGGSGEKKSSENNNNNNNTENSNQSRRSVGRPPKKVAGESSNNNNSASVSAKRGRERSGNGGREKRPKKRTRK 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2659 743 CDD SANT 31 63 IPR001005 -
Prci6g2659 743 MobiDBLite consensus disorder prediction 278 336 - -
Prci6g2659 743 SUPERFAMILY Bromodomain 339 444 IPR036427 GO:0005515
Prci6g2659 743 Gene3D - 23 81 - -
Prci6g2659 743 MobiDBLite consensus disorder prediction 487 503 - -
Prci6g2659 743 MobiDBLite consensus disorder prediction 146 176 - -
Prci6g2659 743 MobiDBLite consensus disorder prediction 510 524 - -
Prci6g2659 743 MobiDBLite consensus disorder prediction 568 603 - -
Prci6g2659 743 Pfam Bromodomain 347 426 IPR001487 GO:0005515
Prci6g2659 743 MobiDBLite consensus disorder prediction 707 723 - -
Prci6g2659 743 MobiDBLite consensus disorder prediction 444 743 - -
Prci6g2659 743 Gene3D - 330 441 IPR036427 GO:0005515
Prci6g2659 743 MobiDBLite consensus disorder prediction 677 699 - -
Prci6g2659 743 MobiDBLite consensus disorder prediction 278 296 - -
Prci6g2659 743 MobiDBLite consensus disorder prediction 1 28 - -
Prci6g2659 743 MobiDBLite consensus disorder prediction 146 265 - -
Prci6g2659 743 ProSiteProfiles Myb-like domain profile. 24 63 IPR001005 -
Prci6g2659 743 MobiDBLite consensus disorder prediction 449 464 - -
Prci6g2659 743 ProSiteProfiles Bromodomain profile. 351 423 IPR001487 GO:0005515
Prci6g2659 743 MobiDBLite consensus disorder prediction 612 626 - -
Prci6g2659 743 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 19 743 - -
Prci6g2659 743 Pfam Myb-like DNA-binding domain 29 63 IPR001005 -
Prci6g2659 743 SUPERFAMILY Homeodomain-like 24 64 IPR009057 -
Prci6g2659 743 SMART sant 28 85 IPR001005 -
Prci6g2659 743 MobiDBLite consensus disorder prediction 535 549 - -
Prci6g2659 743 SMART bromo_6 336 442 IPR001487 GO:0005515
Prci6g2659 743 MobiDBLite consensus disorder prediction 659 676 - -
Prci6g2659 743 MobiDBLite consensus disorder prediction 207 240 - -
Prci6g2659 743 Coils Coil 129 163 - -
Prci6g2659 743 CDD Bromodomain 346 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2659 Prci-Chr6 38452888 38458323 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci6g2659 Bromodomain 3.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2659 - - pcin:129314686 1125.54