LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci6g2657	ATGTGGAGATTTAAGCCATTCATGCAAAAAGAGCCAGCTGGGCTTGAAGGCCGTTCTATTGACATTGGTAATCTTAAAGTAAATATCCTGAAGGCCATTGCTGAAGGAGGGTTCTCTTGTGTCTACTTGGCCCGTGATGCTGTACACATGTCAAAACAATATGCTTTGAAGCACATGATATGCAATGATGAAGAATCGCTTGAATTAGTAAAGAAGGAGATTTCAGTCATGAAGTCATTGAAAGGGCACCCCAATGTGGTCACACTTTATGCTCATACAGTCTTTGATATGGGTAGGACGAAAGAGGCTTTCATTGTTATGGAATTTTGTGATAAGTCTCTAGTTAATGTGCTGGAGAGCCGAGGTTCTGGTTATTTTGATGAGAAGCAGGTTCTTCTAATCTTCAGGGATGTATGTAATGCAGTTTTTGCTATGCACTGCCAATCCCCACCTATTGCTCACCGAGACTTGAAAGCTGAGAATCTTTTATTAGGCCCAGATGGTTTATGGAAATTATGTGATTTTGGGAGTACTTCCACCAATCACAAGCGTTTTGAGAAACCAGAAGAAATGGGAATTGAGGAAGACAATATCAGGAAGCATACAACTCCTGCCTACCGGGCCCCTGAGATGTGGGATCTGTTCCTGAGAGAAGTCATCAACGAGAAAGTGGACATATGGGCATTGGGGTGTCTTCTTTTCCGCATATGCTACTTCAAAAGTGCATTTGATGGTGAATCAAAATTGCAAGTCTTAAATGGAAACTATCGCATTCCTGATTTGCCAAAATACAGCTCATCCATCACGGACCTAATCAGAGATATGCTCCAGGCCAGACCAGACGACAGACCAGATATCACGCAGGTCTGGTTTCGTATCAATGAGCAGTTACCTATCGATCTGCAGAAGTCATTACCTGACAGACCACCTGAATTGCCATCTTCCAACATGCACGAAGCAGGTTCTGCAAAGCCTGCAACTCAGTCATCTCCAGTGCCTCGTCGGAGTCCACCCCCTCCACCCTTATCTGGAGAAACCAAAAATTCGTCACAGACATCCAATTCTTCTAGTGGAGGGGGAAGTGGAGGACAGCTTGGCGCTTTCTGGTCTAGTATGCATGCAAAGGACTCGTCTGTCTCTGAGGTTAAGAGCAGACCGATATTTGATGAAGAGCCATCTAGCCATCATGTCTCAGCAAAACATGATAAAATTCGTTCTGAAAATAACCAATTATCCAAAAATGTTGGTGGTAAAAAAGTGGAAAATGGACAGCCGCTAAATGTAAAAAACAGTGAACATGGAAAATCATACAAACTTGATACTGGATCTTCCAAGGACTTTGAGATAAAATTTTACCAGGACACACATCAAGCTGGTGCGAGGCGAGCTTCTTTGAGTAAGGAGAACGCTGCTGCCTTCCAAGACAAGGCTTTTGACACATTTGTTGCTGAATTTGATACGAGTAAGCTTAGCTCTGGATTCAGTGATAAAAAACCTGAAAAGGAGGAAGCATTGGAGGCTGAGATGGGGAAACTGAGAGCGCAGCTGAAGGAAGCTCAGCTGGAGAAGGCTGAAATTACTTCAAAGTATGAAAAGCTCTCTGCCATCTGCCGATCTCAAAGGCAAGAGATACAGGAACTCAGGCAAACAATTGCAGCAAGAACTCCATCACCAAAGAGAGATGGTTTGAGCGCCTCTCCTACAGTTCCATTATCTGCCACCACGCAGAGGGAGAAGGTTAGCGGGACAATGTGGGAACTCCAGCAAAACAAAACTGAGACAAAAAGTCCGAGTTCAGAACCAAAGTCATGGCAAGCTTTTGCAGAGGAACCCCAGCAACAAAATTCTGCTTCTGCGGACAGCAGAGCCAAATCTGTTAGGACCAGAAAAATTTATCAAAACGAGCAACCAGTCCAACCAACTTCAGATTTTGATTCATGGGGTTTTGGAACAGATAGTTTCACTGCTGTGTCTTCTGCTGGCATTTCACAGAAGCCTAGACCACCTAGCACAGAAGCGAGTAATTCTCAGTCTCAGGCTTTTGGTAATGCCAAGACATATGAGAGCAAGTCAGCTTCCCAACCTGCTGGATGGGCTGGTTTCTAA	2106	0.4416	MWRFKPFMQKEPAGLEGRSIDIGNLKVNILKAIAEGGFSCVYLARDAVHMSKQYALKHMICNDEESLELVKKEISVMKSLKGHPNVVTLYAHTVFDMGRTKEAFIVMEFCDKSLVNVLESRGSGYFDEKQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGPDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKHTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSSITDLIRDMLQARPDDRPDITQVWFRINEQLPIDLQKSLPDRPPELPSSNMHEAGSAKPATQSSPVPRRSPPPPPLSGETKNSSQTSNSSSGGGSGGQLGAFWSSMHAKDSSVSEVKSRPIFDEEPSSHHVSAKHDKIRSENNQLSKNVGGKKVENGQPLNVKNSEHGKSYKLDTGSSKDFEIKFYQDTHQAGARRASLSKENAAAFQDKAFDTFVAEFDTSKLSSGFSDKKPEKEEALEAEMGKLRAQLKEAQLEKAEITSKYEKLSAICRSQRQEIQELRQTIAARTPSPKRDGLSASPTVPLSATTQREKVSGTMWELQQNKTETKSPSSEPKSWQAFAEEPQQQNSASADSRAKSVRTRKIYQNEQPVQPTSDFDSWGFGTDSFTAVSSAGISQKPRPPSTEASNSQSQAFGNAKTYESKSASQPAGWAGF	701

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci6g2657	701	MobiDBLite	consensus disorder prediction	567	622	-	-
	Prci6g2657	701	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	152	164	IPR008271	GO:0004672\|GO:0006468
	Prci6g2657	701	PANTHER	SERINE/THREONINE PROTEIN KINASE	1	684	-	-
	Prci6g2657	701	MobiDBLite	consensus disorder prediction	380	408	-	-
	Prci6g2657	701	MobiDBLite	consensus disorder prediction	630	693	-	-
	Prci6g2657	701	Coils	Coil	502	550	-	-
	Prci6g2657	701	FunFam	probable serine/threonine-protein kinase DDB_G0280111	10	305	-	-
	Prci6g2657	701	MobiDBLite	consensus disorder prediction	380	439	-	-
	Prci6g2657	701	ProSiteProfiles	Protein kinase domain profile.	27	297	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci6g2657	701	MobiDBLite	consensus disorder prediction	547	701	-	-
	Prci6g2657	701	CDD	STKc_GAK_like	26	298	-	-
	Prci6g2657	701	SMART	serkin_6	27	291	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci6g2657	701	Pfam	Protein kinase domain	29	289	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci6g2657	701	MobiDBLite	consensus disorder prediction	345	364	-	-
	Prci6g2657	701	Gene3D	Transferase(Phosphotransferase) domain 1	11	305	-	-
	Prci6g2657	701	MobiDBLite	consensus disorder prediction	301	368	-	-
	Prci6g2657	701	SUPERFAMILY	Protein kinase-like (PK-like)	28	341	IPR011009	-
	Prci6g2657	701	Coils	Coil	701	701	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci6g2657	Prci-Chr6	38409636	38414235	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci6g2657	31	292	CBL-interacting serine-threonine protein kinases	AT4G18700	29.137	3.57e-20	92.4

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NAK	Prci6g2657		Pkinase	1.9e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci6g2657	K08853		-	qsa:O6P43_001313	978.008