Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2654 ATGTGGAGATTTAAGCCATTCATGCAAAAAGAGCCAGCTGGGCTTGAAGGCCGTTCTATTGACATTGGTAATCTTAAAGTAAATATCCTGAAGGCCATTGCTGAAGGAGGGTTCTCTTGTGTCTACTTGGCCCGTGATGCTGTACACATGTCAAAACAATATGCTTTGAAGCACATGATATGCAATGATGAAGAATCGCTTGAATTAGTAAAGAAGGAGATTTCAGTCATGAAGTCATTGAAAGGGCACCCCAATGTGGTCACACTTTATGCTCATACAGTCTTTGATATGGGTAGGACGAAAGAGGCTTTCATTGTTATGGAATTTTGTGATAAGTCTCTAGTTAATGTGCTGGAGAGCCGAGGTTCTGGTTATTTTGATGAGAAGCAGGTTCTTCTAATCTTCAGGGATGTATGTAATGCAGTTTTTGCTATGCACTGCCAATCCCCACCTATTGCTCACCGAGACTTGAAAGCTGAGAATCTTTTATTAGGCCCAGATGGTTTATGGAAATTATGTGATTTTGGGAGTACTTCCACCAATCACAAGCGTTTTGAGAAACCAGAAGAAATGGGAATTGAGGAAGACAATATCAGGAAGCATACAACTCCTGCCTACCGGGCCCCTGAGATGTGGGATCTGTTCCTGAGAGAAGTCATCAACGAGAAAGTGGACATATGGGCATTGGGGTGTCTTCTTTTCCGCATATGCTACTTCAAAAGTGCATTTGATGGTGAATCAAAATTGCAAGTCTTAAATGGAAACTATCGCATTCCTGATTTGCCAAAATACAGCTCATCCATCACGGACCTAATCAGAGATATGCTCCAGGCCAGACCAGACGACAGACCAGATATCACGCAGGTCTGGTTTCGTATCAATGAGCAGTTACCTATCGATCTGCAGAAGTCATTACCTGACAGACCACCTGAATTGCCATCTTCCAACATGCACGAAGCAGGTTCTGCAAAGCCTGCAACTCAGTCATCTCCAGTGCCTCGTCGGAGTCCACCCCCTCCACCCTTATCTGGAGAAACCAAAAATTCGTCACAGACATCCAATTCTTCTAGTGGAGGGGGAAGTGGAGGACAGCTTGGCGCTTTCTGGTCTAGTATGCATGCAAAGGACTCGTCTGTCTCTGAGGTTAAGAGCAGACCGATATTTGATGAAGAGCCATCTAGCCATCATGTCTCAGCAAAACATGATAAAATTCGTTCTGAAAATAACCAATTATCCAAAAATGTTGGTGGTAAAAAAGTGGAAAATGGACAGCCGCTAAATGTAAAAAACAGTGAACATGGAAAATCATACAAACTTGATACTGGATCTTCCAAGGACTTTGAGATAAAATTTTACCAGGACACACATCAAGCTGGTGCGAGGCGAGCTTCTTTGAGTAAGGAGAACGCTGCTGCCTTCCAAGACAAGGCTTTTGACACATTTGTTGCTGAATTTGATACGAGTAAGCTTAGCTCTGGATTCAGTGATAAAAAACCTGAAAAGGAGGAAGCATTGGAGGCTGAGATGGGGAAACTGAGAGCGCAGCTGAAGGAAGCTCAGCTGGAGAAGGCTGAAATTACTTCAAAGTATGAAAAGCTCTCTGCCATCTGCCGATCTCAAAGGCAAGAGATACAGGAACTCAGGCAAACAATTGCAGCAAGAACTCCATCACCAAAGAGAGATGGTTTGAGCGCCTCTCCTACAGTTCCATTATCTGCCACCACGAGGGAGAAGGTTAGCGGGACAATGTGGGAACTCCAGCAAAACAAAACTGAGACAAAAAGTCCGAGTTCAGAACCAAAGTCATGGCAAGCTTTTGCAGAGGAACCCCAGCAACAAAATTCTGCTTCTGCGGACAGCAGAGCCAAATCTGTTAGGACCAGAAAAATTTATCAAAACGAGCAACCAGTCCAACCAACTTCAGATTTTGATTCATGGGGTTTTGGAACAGATAGTTTCACTGCTGTGTCTTCTGCTGGCATTTCACAGAAGCCTAGACCACCTAGCACAGAAGCGAGTAATTCTCAGTCTCAGGCTTTTGGTAATGCCAAGACATATGAGAGCAAGTCAGCTTCCCAACCTGCTGGATGGGCTGGTTTCTAA 2103 0.4413 MWRFKPFMQKEPAGLEGRSIDIGNLKVNILKAIAEGGFSCVYLARDAVHMSKQYALKHMICNDEESLELVKKEISVMKSLKGHPNVVTLYAHTVFDMGRTKEAFIVMEFCDKSLVNVLESRGSGYFDEKQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGPDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKHTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSSITDLIRDMLQARPDDRPDITQVWFRINEQLPIDLQKSLPDRPPELPSSNMHEAGSAKPATQSSPVPRRSPPPPPLSGETKNSSQTSNSSSGGGSGGQLGAFWSSMHAKDSSVSEVKSRPIFDEEPSSHHVSAKHDKIRSENNQLSKNVGGKKVENGQPLNVKNSEHGKSYKLDTGSSKDFEIKFYQDTHQAGARRASLSKENAAAFQDKAFDTFVAEFDTSKLSSGFSDKKPEKEEALEAEMGKLRAQLKEAQLEKAEITSKYEKLSAICRSQRQEIQELRQTIAARTPSPKRDGLSASPTVPLSATTREKVSGTMWELQQNKTETKSPSSEPKSWQAFAEEPQQQNSASADSRAKSVRTRKIYQNEQPVQPTSDFDSWGFGTDSFTAVSSAGISQKPRPPSTEASNSQSQAFGNAKTYESKSASQPAGWAGF 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2654 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Prci6g2654 700 MobiDBLite consensus disorder prediction 380 408 - -
Prci6g2654 700 Coils Coil 502 550 - -
Prci6g2654 700 MobiDBLite consensus disorder prediction 547 700 - -
Prci6g2654 700 MobiDBLite consensus disorder prediction 380 439 - -
Prci6g2654 700 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2654 700 CDD STKc_GAK_like 26 298 - -
Prci6g2654 700 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2654 700 PANTHER SERINE/THREONINE PROTEIN KINASE 1 683 - -
Prci6g2654 700 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2654 700 MobiDBLite consensus disorder prediction 345 364 - -
Prci6g2654 700 Gene3D Transferase(Phosphotransferase) domain 1 11 305 - -
Prci6g2654 700 MobiDBLite consensus disorder prediction 301 368 - -
Prci6g2654 700 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Prci6g2654 700 SUPERFAMILY Protein kinase-like (PK-like) 28 341 IPR011009 -
Prci6g2654 700 MobiDBLite consensus disorder prediction 567 621 - -
Prci6g2654 700 MobiDBLite consensus disorder prediction 629 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2654 Prci-Chr6 38409618 38414235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2654 31 292 CBL-interacting serine-threonine protein kinases AT4G18700 29.137 3.35e-20 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Prci6g2654 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2654 K08853 - qsa:O6P43_001313 974.541