Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2650 ATGGCCAAATGGAGCCACAAGGCTCGCAAGCACTCTTACATCTCTGTCCCTTCTCAGATCATCAGCTCCTTATCGTCTTCTTCTCTACAATCTCTGCTTGAATCACCCAAGAAATCTTCCAGAAACTTCAAGTTCTTCTTGTCCTTCAGAAGCTCACGACTCTGGTTTCTCACTCTCTTCTTCGTTGGTTTCCTTGGGATGCTCAAGTTTGGATTCGACTTTGATGTGCCGTTTTCTCCCTACCCTTGTGCTACACCTCAGCTGAATCTCCCGGCAATCTCAAACGGTCACTTTGAATCTCCCCATCATCAAAATCTTAAGAAAGACGAGGTTTTGGATGATACGAGGTTGTCGCTGTCCAATGTAGAGGTGAAAGAGGAGGTTGATGATGGGGAAGTTGAGAAGAGCGAGTTCTGGAAGCAACCAGACGGATTGGGTTACAGGCCTTGCTTGGGCTTCAGTAGGGATTACAGGAAACAAACCGAAGGGATTGTGAAGAACAGGAGGAAGTACCTCATGGTTGTGGTCTCTGGTGGGATGAATCAACAGAGGAATCAAATTGTCGATGCTGTTGTCATTGCTAGGATCCTCGGAGCTGCCTTGGTTGTCCCAATTTTGCAAGTCAACGTCATTTGGGGCGACGAAAGTGAATTCGCTGATATATTTGATTTGGAGCACTTCAAGAGAGTCCTTGCAAATGATGTTCGAGTGGTTTCTGCATTGCCTTCGACACACTTAACGACCAGACCAGTGGAAGGAAGCCCTCCACTTCATGTCACTCCAAGCTGGATACGCTCTCGGTATCTCAGAAGACTTACCAGAGAAGGTGTTTTGCTCTTACGTGGCTTGGATTCAAGGCTGTCGAAGGATCTTCCTCCTGATCTTCAGAAGCTTCGATGCAAGGTTGCTTTTCATGCCTTAAGGTTTGCGAGGCCAGTTCAAGAACTTGGTGACAAGATTGCCGAGAGGATGAGAAGCAAGGGACCATACCTTGCCCTTCATCTTCGAATGGAGAAGGATGTATGGGTGAGGACCGGGTGCTCTCCGGGTCTAAGTCCCAAGTTTGATGAGACAGTACACAGTGAGAGGATAAACCGGCCAGAGCTATTGACTGCAAAATCAAACATGACTTCCCAAGAAAGGAAGCTTGCTGGTCTATGCCCCTTGAATGCTGTAGAAGTAGTCAGGCTGCTTAAAGGTCTAGGAGCTCCTAAGAATGCAAGAATCTATTGGGCTGGAGGGCAACCATTGGGCGGAAAAGAAGCTTTGCTTCCGTTAATCCAAGAGTTTCCACATTTTTACAGCAAGCATGATCTTGCTGTGCCGGGTGAACTAGAACCGTTTTCCCAAAAAGCGTCTCTGATGGCTGCCATAGATTATGTAGTTTCCGAGAAGAGCGATGTTTTCATGCCATCTCATGGAGGAAACATGGGCCATATGCTTCAGGGTCACCGGGCGTATGCTGGGCACAAGAAATTTATCACACCAAACAAACGACAGATGCTTCCCCATTTTCTGAACTCTTCCCTTCCTGAAGCAGAGTTCAACAGAATCATCAAAGAACTTCATCATGAGTCCTTAGGGCAGCCGGAGCTCCGGAAGCCCGGGAGGGATGTCACCAAGTATCCGGTCCCTGAGTGCATGTGCCAAGACTCACGAGCTGGATCTCACCTGTAA 1677 0.4782 MAKWSHKARKHSYISVPSQIISSLSSSSLQSLLESPKKSSRNFKFFLSFRSSRLWFLTLFFVGFLGMLKFGFDFDVPFSPYPCATPQLNLPAISNGHFESPHHQNLKKDEVLDDTRLSLSNVEVKEEVDDGEVEKSEFWKQPDGLGYRPCLGFSRDYRKQTEGIVKNRRKYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFADIFDLEHFKRVLANDVRVVSALPSTHLTTRPVEGSPPLHVTPSWIRSRYLRRLTREGVLLLRGLDSRLSKDLPPDLQKLRCKVAFHALRFARPVQELGDKIAERMRSKGPYLALHLRMEKDVWVRTGCSPGLSPKFDETVHSERINRPELLTAKSNMTSQERKLAGLCPLNAVEVVRLLKGLGAPKNARIYWAGGQPLGGKEALLPLIQEFPHFYSKHDLAVPGELEPFSQKASLMAAIDYVVSEKSDVFMPSHGGNMGHMLQGHRAYAGHKKFITPNKRQMLPHFLNSSLPEAEFNRIIKELHHESLGQPELRKPGRDVTKYPVPECMCQDSRAGSHL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2650 558 PIRSF UCP009360 19 553 IPR024709 -
Prci6g2650 558 PANTHER OS02G0726500 PROTEIN-RELATED 73 551 - -
Prci6g2650 558 CDD O-FucT_plant 171 492 IPR024709 -
Prci6g2650 558 Pfam GDP-fucose protein O-fucosyltransferase 171 487 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2650 Prci-Chr6 38344880 38348077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2650 12 552 Miscellaneous Gene Families AT3G07900 61.888 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2650 - - gmx:100809592 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g2650 6 38344880 38348077 Prci6g2650 6 38344880 38348077 ECH