Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2639 ATGGCTCACTGGCAGAGCGATTTAGAGGAGGGGATCGATTACATGTTCAAGATTGTGATGATAGGAGACTCTGGTGTCGGGAAATCCCAGCTATTGAATCGTTATGCAAGGAATGAATTCAATGCGAAATCGAAGGCGACGATCGGAGTTGAATTTCAGACCAAGACGGTGCTCATGGATCATAAGGTTGTTAGGGCCCAGATCTGGGATACTGCTGGTCAAGAAAGGTACCAGGCAATTACTACTGCATACTACAGAGGTGCAATTGGTGCATTGCTGGTGTATGACATAACCAGGCAAGATACCTTTGATCATGTCGAAACATGGTTGGAGGAGCTACAAATGCATGCAGATAAGAATGTTGCTGTTATGCTTGTTGGCAACAAGTGTGACTTGGGTTCAATGCGAGTAGTGCCTGTTGAGGTAGCCAAAGAGCTTGCTCAGAGGCATGATCTCTTCTTCATGGAGACATCAGCGCTTGAGTCCACCAATGTAGAGCCAGCTTTCATTGGTCTTCTCTCTCAGATCTATTTAACTATCCGTAAGAAGTCTCTTGTGGCTAATGGAGCAGAATCAAAACTGGAGAAAGTAAATCTTGAAGGGACAGAGATTTATGTCCCTTCAGATGACTTAGAATATCGAAAGGACCCAGAAACTAAAAGGAGGTTCAATTGCTGCAGTTTTTCGTAG 690 0.4435 MAHWQSDLEEGIDYMFKIVMIGDSGVGKSQLLNRYARNEFNAKSKATIGVEFQTKTVLMDHKVVRAQIWDTAGQERYQAITTAYYRGAIGALLVYDITRQDTFDHVETWLEELQMHADKNVAVMLVGNKCDLGSMRVVPVEVAKELAQRHDLFFMETSALESTNVEPAFIGLLSQIYLTIRKKSLVANGAESKLEKVNLEGTEIYVPSDDLEYRKDPETKRRFNCCSFS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2639 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 184 IPR027417 -
Prci6g2639 229 FunFam ras-related protein RABA5a 8 226 - -
Prci6g2639 229 SMART rab_sub_5 16 179 - -
Prci6g2639 229 PANTHER DRAB11-RELATED 12 189 - -
Prci6g2639 229 CDD Rab11_like 13 177 - -
Prci6g2639 229 NCBIfam small GTP-binding protein domain 14 169 IPR005225 GO:0005525
Prci6g2639 229 Gene3D - 9 204 IPR027417 -
Prci6g2639 229 PRINTS Transforming protein P21 ras signature 119 132 - -
Prci6g2639 229 PRINTS Transforming protein P21 ras signature 16 37 - -
Prci6g2639 229 PRINTS Transforming protein P21 ras signature 39 55 - -
Prci6g2639 229 PRINTS Transforming protein P21 ras signature 57 79 - -
Prci6g2639 229 PRINTS Transforming protein P21 ras signature 154 176 - -
Prci6g2639 229 ProSiteProfiles small GTPase Rho family profile. 9 187 - -
Prci6g2639 229 Pfam Ras family 17 176 IPR001806 GO:0003924|GO:0005525
Prci6g2639 229 ProSiteProfiles small GTPase Ras family profile. 6 229 IPR001806 GO:0003924|GO:0005525
Prci6g2639 229 ProSiteProfiles small GTPase Rab1 family profile. 11 226 - -
Prci6g2639 229 SMART rho_sub_3 18 174 IPR001806 GO:0003924|GO:0005525
Prci6g2639 229 SMART ras_sub_4 16 179 - -
Prci6g2639 229 SMART ran_sub_2 21 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2639 Prci-Chr6 38268667 38272416 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2639 K07904 - gmx:100789008 321.242