Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci6g2637 | ATGGACAAAGGAGCGCCTCCTAGCCTCTTTGTTAATGATGGTTCCTTCATGGAAAGGTTCAAGCAACTTCAACAAGAGCAGGAGAAGGACAAAGATGCCAAATTAAAGGAGCCTAAACCGATTAAAATTGTATCAGGGTCTCTGACTTCTAATTTGACCATTAAAAAGAACCCTGTGAACTCTAAGGCTAATGACTCACAGAAAACTGCCCAGGCTAGCTCCAATGGAAAACTTGCTTTTAGTTTGAAACAGAAGTCAAAATTAGTCCCGCCACCTGTTGTGTTGAGTGCTGAAGAGGATGAAGAAGAAACAAATGCTGGTGATACTTCAAGTGATGTGCCATCAAAACGACAGAAGTTGAATAATGACGCTTGCACTGAGCAATCATCAAGACGGCTAGAAGTTGCACCTCCTTCCCCAAGTGACCCTACAGTGAAGAAAGTTGCTGACAAACTAGCAAGTTTTGTGGCGAAAAATGGAAGGCAATTTGAGGATGTCACACGTCAAAAAAATCCTGGAGATACGCCTTTCAAATTCTTATTTGATGAGAAATGTGCTGATTACAAATATTACCAACATCGGCTTGCTCAAGAAGAAAAGGCTCTTGCACAATCAAAGGAGTCACAGGAATCTCATAATGGTAGTACGAGCACCTCATCATCCAAATCAACAACTGGTTCTCAGAGAACATCTCAACAGCAATCAACTTACCAAATTCCTGCATCTGCTTTATATCAGACTGCTGATGAGCCTGGTGCAGTATCAAATGCTGATTCATTGGCACGGATGGAGTTCTACATGATGAAAGCTGCCCAGGAGGAGAGGAGGAGACAACCGAAGCAGTCAAAAGATGAGATGCCACCTCCTGCTTGTCTTCAAGCTCCTGCAAAAAAGGGACATCACATGGGTGATTACATCCCTCCAGAAGAACTTGAGAAGTTTTTAGCTACGTGCAATGATGCAGCGGCTCAAAAAGCTGCCAAGGAAGCTGCAGAGAAGGCAAAAATTCAGGCTGATAATGTGGGCCACAAGCTTTTGTCAAAAATGGGCTGGAAAGAAGGTGAGGGATTAGGGAGCTCTGGAAAGGGTATGTCAGATCCAATCATGGCAGGCAATGTTAAGATGAATAATTTGGGTGTTGGGGCTCAACAACCAGGGGAGGTGACTCCTGATGATGATATATATGAACAGTACAAGAAGCGGATGATGCTTGGTTATCGTTACAGACCCAACCCTCTGAATAATCCTCGCAAGGCATATTATTGA | 1266 | 0.4344 | MDKGAPPSLFVNDGSFMERFKQLQQEQEKDKDAKLKEPKPIKIVSGSLTSNLTIKKNPVNSKANDSQKTAQASSNGKLAFSLKQKSKLVPPPVVLSAEEDEEETNAGDTSSDVPSKRQKLNNDACTEQSSRRLEVAPPSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDEKCADYKYYQHRLAQEEKALAQSKESQESHNGSTSTSSSKSTTGSQRTSQQQSTYQIPASALYQTADEPGAVSNADSLARMEFYMMKAAQEERRRQPKQSKDEMPPPACLQAPAKKGHHMGDYIPPEELEKFLATCNDAAAQKAAKEAAEKAKIQADNVGHKLLSKMGWKEGEGLGSSGKGMSDPIMAGNVKMNNLGVGAQQPGEVTPDDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY | 421 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci6g2637 | 421 | SMART | surpneu2 | 146 | 200 | IPR000061 | GO:0003723|GO:0006396 | |
Prci6g2637 | 421 | PANTHER | ARGININE/SERINE RICH SPLICING FACTOR SF4/14 | 296 | 421 | IPR040169 | - | |
Prci6g2637 | 421 | MobiDBLite | consensus disorder prediction | 272 | 302 | - | - | |
Prci6g2637 | 421 | Pfam | G-patch domain | 339 | 382 | IPR000467 | GO:0003676 | |
Prci6g2637 | 421 | MobiDBLite | consensus disorder prediction | 157 | 176 | - | - | |
Prci6g2637 | 421 | MobiDBLite | consensus disorder prediction | 23 | 148 | - | - | |
Prci6g2637 | 421 | SUPERFAMILY | Surp module (SWAP domain) | 133 | 200 | IPR035967 | GO:0003723|GO:0006396 | |
Prci6g2637 | 421 | MobiDBLite | consensus disorder prediction | 44 | 81 | - | - | |
Prci6g2637 | 421 | ProSiteProfiles | G-patch domain profile. | 338 | 385 | IPR000467 | GO:0003676 | |
Prci6g2637 | 421 | ProSiteProfiles | SURP motif repeat profile. | 148 | 191 | IPR000061 | GO:0003723|GO:0006396 | |
Prci6g2637 | 421 | MobiDBLite | consensus disorder prediction | 23 | 39 | - | - | |
Prci6g2637 | 421 | SMART | G-patch_5 | 336 | 383 | IPR000467 | GO:0003676 | |
Prci6g2637 | 421 | MobiDBLite | consensus disorder prediction | 108 | 135 | - | - | |
Prci6g2637 | 421 | Gene3D | Surp module | 119 | 205 | IPR035967 | GO:0003723|GO:0006396 | |
Prci6g2637 | 421 | Pfam | Surp module | 147 | 197 | IPR000061 | GO:0003723|GO:0006396 | |
Prci6g2637 | 421 | MobiDBLite | consensus disorder prediction | 200 | 256 | - | - | |
Prci6g2637 | 421 | MobiDBLite | consensus disorder prediction | 207 | 243 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci6g2637 | Prci-Chr6 | 38233915 | 38240658 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci6g2637 | 327 | 384 | C2H2 Transcription Factor Family | AT5G26610 | 43.103 | 1.61e-08 | 53.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci6g2637 | K13096 | - | gmx:100786213 | 592.423 |