Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2621 ATGGTGGAGAAGACGGCGAAAGGGAGAAAGGAGGAGGTGGTCACCAGAGAGTACACCATCAACCTCCACAAGCGCCTGCATGGATGCACATTCAAAAAGAAGGCTCCAAAGGCAATCAAGGAAATTAGAAAGTTCGCCCAGAAGGCTATGGGAACATCTGATGTGAGAGTGGATGTCAAGCTTAACAAGCATGTTTGGAGTGGTGGAATCCGCAGCGTCCCAAGGAGAATTCGTGTTCGCATAGCCCGAAAAAGAAACGATGAAGAAGATGCCAAGGAAGAGTTTTACTCATTAGTCACTGTTGTAGACATCTCAAGAGAAGAATTGAAAGGTTTGGGCACCAAGGTGATTGATGAAGAGGATTAA 366 0.4617 MVEKTAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTSDVRVDVKLNKHVWSGGIRSVPRRIRVRIARKRNDEEDAKEEFYSLVTVVDISREELKGLGTKVIDEED 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2621 121 SUPERFAMILY Ribosomal protein L31e 12 93 IPR023621 -
Prci6g2621 121 CDD Ribosomal_L31e 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Prci6g2621 121 SMART Ribosomal_L31e_2 11 94 IPR000054 GO:0003735|GO:0005840|GO:0006412
Prci6g2621 121 Gene3D - 10 121 IPR023621 -
Prci6g2621 121 FunFam 60S ribosomal protein L31 7 120 - -
Prci6g2621 121 Pfam Ribosomal protein L31e 12 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Prci6g2621 121 PANTHER 60S RIBOSOMAL PROTEIN L31 2 120 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2621 Prci-Chr6 38143344 38145210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2621 7 121 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 81.739 4.00e-66 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2621 K02910 - cave:132168137 200.675