Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2597 ATGAATTATAATAGACCAATGGAGGTCCATTACATAGATACGGGCTTTCCTTACACTGTTACTGAAAGTTTCATGGACTTCTTTGAAGGCATCACGTATATGCCAGCAAATTGTCTCCACACTGGATCCATGCCTGATCAGGAAAGTGCCAACTGGATGATGAATATGAGCCCATATAAATATGACATGTCTGGCCCTTTGTGTCCATCATATTTTGGTTATCCTGAATATATCCTTCCCTTACCAAGAGTGGAGGTCTACAGGGGACAGTGGGAAAACCCTTCAACAATGACCGTTGAGGAACCTGCTACAACAGACACTTTTTCCAGGGGAGATGGAGTTGCTGGCATGCAGACTATACCTGAAGAATGCAGCCCAAATCATCAAGACGCCACTAGTACCCAGGTTGCATGGCAGCAAGACAGCATCGATCCTGATAATATGACTTATGAGGAATTACTGGACTTGGGTGAGGCAGTTGGAACTCAAAGCAGGGGCCTTTCCAAAGAACTTATTGATCTTCTTCCAGTCTCAAAGTACAAGTTCAGAAGCATGTTTAAAAGAAAAAAATATGGGAAAAGGTGTGTGATTTGTCAGATGACATACAAAAGAGGTGACCAACAAATGAAATTGCCATGCACGCATGTTTACCATAGCGAATGCATCTCCAAATGGCTTAGCATTAACAAGAAATGCCCGGTTTGCAACGCTGAGGTGTTTTGCGAGGATTCAAGGAATTAG 741 0.4291 MNYNRPMEVHYIDTGFPYTVTESFMDFFEGITYMPANCLHTGSMPDQESANWMMNMSPYKYDMSGPLCPSYFGYPEYILPLPRVEVYRGQWENPSTMTVEEPATTDTFSRGDGVAGMQTIPEECSPNHQDATSTQVAWQQDSIDPDNMTYEELLDLGEAVGTQSRGLSKELIDLLPVSKYKFRSMFKRKKYGKRCVICQMTYKRGDQQMKLPCTHVYHSECISKWLSINKKCPVCNAEVFCEDSRN 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2597 246 Pfam Ring finger domain 194 236 IPR001841 -
Prci6g2597 246 SMART ring_2 195 235 IPR001841 -
Prci6g2597 246 ProSiteProfiles Zinc finger RING-type profile. 195 236 IPR001841 -
Prci6g2597 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 157 240 IPR013083 -
Prci6g2597 246 FunFam E3 ubiquitin ligase BIG BROTHER 157 240 - -
Prci6g2597 246 SUPERFAMILY RING/U-box 194 241 - -
Prci6g2597 246 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 241 IPR033276 GO:0004842|GO:0016567|GO:0046621
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2597 Prci-Chr6 37865404 37872071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2597 4 244 C3H Transcription Factor Family AT3G63530 52.263 3.27e-84 249