Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2588 ATGGCATTGTGTGGCCGAATTAGATCAGGCATCTCTCTCGTCAACAAATTGACGTATTTAGTTCCGATGCTATCTACCCAGAGATCCAGACTTCACCGATCCCTGATCACCCCTTTCAGTTCCTTGGTGCCACTGGCCTTGTTTGGAGGCTCAGGAAACTATGCATCTGCTTTGTATACTGCAGCAGTTAAAGCTAATGCATTGGAAAAGGTTGAGTCTGAGATTCTTGACCTTGTTGCGGCAACAAAGAATAGTCCTAAATTTGCACAGTTTACAAAGGACTTGTCTGTGCCTAAAGATACCAGAATTAAGGCGATGCAGGAAATTTCTAAGGATGCTAAATTTTCAGATATTACGAAGAACTTCCTTGTTATCTTGGCTGAGAATGGGAGGCTAAGAAATTTAGATACCATAGCAAAGAAGTTTGCGGACTTGACAATGGCACATAAGGGAGAAGTGAAAGCCATTGTGACCACTGTGATTCCACTTCTCCCTCAAGAAGAGAAGCAACTGAAAGAGACCCTTCAGGAGATCATAGGTGCAGAAAAGGTTCTTATTGAACAGAAGATTGATCCTAGCATCCTTGGTGGTTTAGTGGTAGAATTTAACCAGAAAGTCCTAGATGTGTCAATTAAGACTAGGGCAAGCCAGATGGAGCGGTTCCTCCGAGAGCCCATAAACATTGGCGACATCTAG 696 0.4325 MALCGRIRSGISLVNKLTYLVPMLSTQRSRLHRSLITPFSSLVPLALFGGSGNYASALYTAAVKANALEKVESEILDLVAATKNSPKFAQFTKDLSVPKDTRIKAMQEISKDAKFSDITKNFLVILAENGRLRNLDTIAKKFADLTMAHKGEVKAIVTTVIPLLPQEEKQLKETLQEIIGAGXKVLIEQKIDPSILGGLVVEFNQKVLDVSIKTRASQMERFLREPINIGDI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2588 232 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 185 204 IPR020781 GO:0015986|GO:0016020|GO:0046933
Prci6g2588 232 Pfam ATP synthase delta (OSCP) subunit 52 221 IPR000711 GO:0015986|GO:0046933
Prci6g2588 232 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 51 152 IPR026015 -
Prci6g2588 232 PANTHER ATP SYNTHASE DELTA CHAIN 39 225 IPR000711 GO:0015986|GO:0046933
Prci6g2588 232 PRINTS ATP synthase delta subunit signature 131 145 IPR000711 GO:0015986|GO:0046933
Prci6g2588 232 PRINTS ATP synthase delta subunit signature 120 131 IPR000711 GO:0015986|GO:0046933
Prci6g2588 232 PRINTS ATP synthase delta subunit signature 50 69 IPR000711 GO:0015986|GO:0046933
Prci6g2588 232 PRINTS ATP synthase delta subunit signature 198 216 IPR000711 GO:0015986|GO:0046933
Prci6g2588 232 PRINTS ATP synthase delta subunit signature 183 198 IPR000711 GO:0015986|GO:0046933
Prci6g2588 232 Hamap ATP synthase subunit delta [atpD]. 46 225 IPR000711 GO:0015986|GO:0046933
Prci6g2588 232 Gene3D - 51 143 IPR026015 -
Prci6g2588 232 NCBIfam ATP synthase F1 subunit delta 53 222 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2588 90 232 Primary Pumps ATPases AT5G13450 65.035 5.31e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2588 K02137 - qsa:O6P43_001354 303.523